Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cwoe_3446 |
Symbol | |
ID | 8733895 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Conexibacter woesei DSM 14684 |
Kingdom | Bacteria |
Replicon accession | NC_013739 |
Strand | - |
Start bp | 3672828 |
End bp | 3673649 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 646504063 |
Product | RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily |
Protein accession | YP_003395239 |
Protein GI | 284044899 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.189666 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.626224 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGCCAA TCAGTTCGGC GCGACGGCCG CACGCTCTGC GGCAGCGCGG CGAGGGCAAG GGGGACCGCC GTACCAGCGA TCAGATCCAC GGGACGCGAC GGCTGCTGGA GCGCTACCAC CTGCGCGGCG ACGAGCGTGC GCGCGAAGAG CTGATCACGC GCTTCCTGCC GCTCGCCCGC CAGCTCGCGC TGCGCTATTA CCACGGCCGC GAGCCGCTCG ACGACCTCGT CCAGGTCGCG TCCGTCGGGC TCGTGAAAGC GGTCGACCGC TTCGAGGTGC GGCGCACGAC CGCATTCGCC AGCTACGCGG TGCCGGTGAT GCTCGGCGAG CTGCGGCGCT ACTTCCGCGA CAACGGCTGG GCGCTGCACG TGCCGCGCGG GCTGCAGGAG CGGGCGCTGG CGGTCGACAG AACGGCGGAC CGGCTGCAGG TCGCCCAGGG CGCCGCACCG ACGCCGGCGC AGATCGCCGA GCAGCTGAAG CTGACGGTCG AGGAGGTCGT CGAGGCGATG GCGGCCGCAC GCGCGACCGA CACCGTCTCG CTCGACGCGC CGCGCCCGAG CGCCGACGGC GAGCGCGACG CGCTCGTCGA CTCGCTCGGC GCCGACGATT CCCGGCTCGA GCTGGTCGAG TACCGGGAAG CGATCGCCGG CGCGCTCGAC GCGCTGCCGG TGCGCGAGCG CGAGATCCTG CGGCTGCGCT TCGAGGAGGA CCGCACGCAG AGCGAGATCG CCGCCCGGCT CGGCGTCTCC CAGATGCAGA TCTCGCGCCT GCTGCGGCGC ACGCTCGAAC GCCTGCGCAG GGTCGCCGAA GCGACCGCGT GA
|
Protein sequence | MPPISSARRP HALRQRGEGK GDRRTSDQIH GTRRLLERYH LRGDERAREE LITRFLPLAR QLALRYYHGR EPLDDLVQVA SVGLVKAVDR FEVRRTTAFA SYAVPVMLGE LRRYFRDNGW ALHVPRGLQE RALAVDRTAD RLQVAQGAAP TPAQIAEQLK LTVEEVVEAM AAARATDTVS LDAPRPSADG ERDALVDSLG ADDSRLELVE YREAIAGALD ALPVREREIL RLRFEEDRTQ SEIAARLGVS QMQISRLLRR TLERLRRVAE ATA
|
| |