| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_3414 |
|---|
| Symbol | |
|---|
| ID | 8733863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | - |
|---|
| Start bp | 3639499 |
|---|
| End bp | 3640068 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 646504031 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_003395207 |
|---|
| Protein GI | 284044867 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.201316 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGAGC TCCACGACGA CGCGCTGCTC GCGGCGGCGG CCGGCGGTGA CGCGGACGCG
TTCGCCGCCT TCTACCGCCG CCACCTCGCC GTCGTCGTCG GCTACATGGT GCGCCGCACG
GGCAACCCCG AGGTCGCGGC TGACCTCGCC GCCGAGACGT TCGCCGCCGC GCTGCTGGCC
TGCCCGCGCT ACCGCCCGGG CGTGACGGCG GCGCGCGCGT GGTTGCTCGC GATCGGCGAG
CACAAGCTGC TCGACAGCCG TCGGCGCGGG CGCGTCGAGA GCGCTGCGCG CCGCCGGCTG
GCGATGGAGC GGATCGAGCT GACCGACGAC GACCTCGACC GCGTCGAGGA GCTGGCCGCA
CATGACCGCG CCCACCCTCC CGCCGCGCTG CTGGACGCGG TCGAGCACCT CGGCGAGGAG
CAGCGCGTGG CAGTTCTCGC GCGCGTCGTG GACGAGCGCG ACTACGCGGA GATCGCGGCC
GAGCTGCGCT GCTCGGAGGC GGTCGTGCGC AAGCGCGTCA GCCGCGGCCT GGCGCGGCTG
CGCACGCAAC TGAGAGGAGC GGAGGCATGA
|
|---|
| Protein sequence | MMELHDDALL AAAAGGDADA FAAFYRRHLA VVVGYMVRRT GNPEVAADLA AETFAAALLA
CPRYRPGVTA ARAWLLAIGE HKLLDSRRRG RVESAARRRL AMERIELTDD DLDRVEELAA
HDRAHPPAAL LDAVEHLGEE QRVAVLARVV DERDYAEIAA ELRCSEAVVR KRVSRGLARL
RTQLRGAEA
|
|---|
| |