Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cwoe_3344 |
Symbol | |
ID | 8733793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Conexibacter woesei DSM 14684 |
Kingdom | Bacteria |
Replicon accession | NC_013739 |
Strand | + |
Start bp | 3554862 |
End bp | 3556691 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 646503961 |
Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
Protein accession | YP_003395137 |
Protein GI | 284044797 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component |
TIGRFAM ID | [TIGR02323] phosphonate C-P lyase system protein PhnK |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0586997 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCCG CGGAGCCGCT GCTGCGCGTC CGCGACCTGC GGATCGCGAG CCGGATCGGC ACGCGCGAGC GGACGATCGC CGCTGGCGTC GAACTGGAGG TGGGGGAGGG CGAGGCGCTC GCGATCGTCG GCGAGTCCGG CAGCGGCAAG TCGATGACCG CGCGCGCGAT CGTCGGACTG CTGCCGCCCG GCGTCCACGC CGAGGGCGAG GTCGCCTACG GCGGACGCGA CCTGCTGCGG CTGAGCCGGC GCGAGCTGAC GGCCGTGCGC GGCAGCGAGA TCGCGCTGAT CTTCCAGGAC CCGTTCACGA TGCTGAACCC GCTGATGCGC TGCGGCGAGC AGATCGCCGA GCTGCTGTGC GACGACGGCG GCCGGCGGCT GCGACGGCGC GCGCGCCGCG CCGAGGCCGT CCGCCGGCTC GCCGAGGTCG GGATCGACGA CGCGGCGGTC GCCGACGCGT TCCCGTTCCA GCTCTCCGGC GGCATGCGCC AGCGCGTCGG GATCGCGGCC GCGCTCGCGC GCGACCCGCG CCTGGTGATC GCCGACGAGC CGTCGACCGC GCTCGACGTG ACGACTCAGC AGGAGATCCT CGAACGGCTC AAGGGGTTGC AGGAGTCGCG CGGGATGGGG CTGATCCTGA TCACGCACGA CCTCCGCGTC GCGTTCTCGA CCTGCGGCCG CGTCGAGGTG CTGTACGCGG GCGCGGTGCT GGAGGAGGGG CCGGCGCATG TGATCGAAGC CGAGCCGCGG CATCCCTACA CGCTCGGCCT GCTGCTGACC GAGCCGCCGA TCGACCGGCG GCTCGACGCG CTGCCGGTGA TCCCCGGCTC GGTCCCGGAC GCCGACGAGG TCGCGGGCGG CTGCGCTTTT GCCGCGCGCT GCGCGTGGGC GGAGCCGGCC TGCTCGCAGG GCGCGCCGCC GCTGCTCGCC GCCGGGCTGG ATCGCCGCAC GGCGTGCCGC CGCGCGGAGC AGATCGCCGA CGAGCTGGAC GAGCGCCGCC GCGAGCTGGT CGCCGCGCGC GTCGAGCCGC CGGCACCGGC CGACGCGGCG CCGCTGGTCG AGGTCCGCTC GATCGCGAAG GTGTTCGGCG GCGCGCGCGA CGGGCGCACC GTCGTCGCGC TCGACGACGT CTCGCTGGAG GTCGCCGCCG GCGAGTGCGT CGCGCTCGTC GGCGAGTCGG GCTCGGGCAA GACGACGCTC GGCCGCTGCC TGCTGGGGCT GGAGCGTCCG GACTCCGGCA CGCTGCTGGT CGACGGCATC GACGCGAGCG ACTACGACGC GCTCCCGACC GCCGAGCGGC GCCGGCTGCG GCGGACGATC CAGATGGTCT TCCAGGATCC GTACGCGACG CTCAACCCGG CGCGCACGAT CGGCGCGACG CTGAAGGAGG CGCTGCTCGT GCACGACCCA CGGCTCGCCG ACGTGCGCGG CCGTGTCGAC GAGCTGCTGG TGCAGGTCGG CCTCTCGCCG GCGTACGCCG AGCGCAAGCC GGTCGCGCTC TCCGGCGGCG AGCGCCAGCG CGTCGCCGTC GCCCGCGCGC TCGCGGCCGA GCCGCGCGTG ATCGTGTGCG ACGAGGCCGT CTCGGCGCTC GACGTCTCCG TCCAGGCGCA GATCCTCAAC CTGCTGGCGT CGGTGCGCGA GCAGCTCGGC GTCGGCTACC TCTTCATCAC GCACGACCTC GCCGTCGTGC GCCAGGTCGC CGACCGCGTC TACGTGCTGA AGAGCGGCCG CCTGGTCGAG CACGGCCGCT GCGCCGACGT GCTCGACGAC CCGCAGGACC CGTACACACG TGCGCTGATC GGCTCGATCC CGACCGCGAG GACCGCATGA
|
Protein sequence | MSAAEPLLRV RDLRIASRIG TRERTIAAGV ELEVGEGEAL AIVGESGSGK SMTARAIVGL LPPGVHAEGE VAYGGRDLLR LSRRELTAVR GSEIALIFQD PFTMLNPLMR CGEQIAELLC DDGGRRLRRR ARRAEAVRRL AEVGIDDAAV ADAFPFQLSG GMRQRVGIAA ALARDPRLVI ADEPSTALDV TTQQEILERL KGLQESRGMG LILITHDLRV AFSTCGRVEV LYAGAVLEEG PAHVIEAEPR HPYTLGLLLT EPPIDRRLDA LPVIPGSVPD ADEVAGGCAF AARCAWAEPA CSQGAPPLLA AGLDRRTACR RAEQIADELD ERRRELVAAR VEPPAPADAA PLVEVRSIAK VFGGARDGRT VVALDDVSLE VAAGECVALV GESGSGKTTL GRCLLGLERP DSGTLLVDGI DASDYDALPT AERRRLRRTI QMVFQDPYAT LNPARTIGAT LKEALLVHDP RLADVRGRVD ELLVQVGLSP AYAERKPVAL SGGERQRVAV ARALAAEPRV IVCDEAVSAL DVSVQAQILN LLASVREQLG VGYLFITHDL AVVRQVADRV YVLKSGRLVE HGRCADVLDD PQDPYTRALI GSIPTARTA
|
| |