Gene Cwoe_3261 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_3261 
Symbol 
ID8733710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp3469919 
End bp3470953 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content75% 
IMG OID646503878 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003395054 
Protein GI284044714 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02960] RNA polymerase sigma-70 factor, TIGR02960 family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.308764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0161723 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCC ACGCCGGCGT ACCGACGATC CGCGAGCAGC GGCTGCTCGC CGCGGCGCAG 
GGCGGCGACG AAGGGGCGTA CCGCGGCCTC GTCGAGCCGT TCCGGCGCGA GCTGCACGCC
CACTGCTACC GGATGCTCGG TTCCGTGCAC GACGCCGAGG ACGCGCTGCA GGACGCGCTG
CTGCGCGCGT GGCGGGGCCT CCCCCGCTTC CAGGCGCGCA GCTCGCTGCG GGCCTGGCTC
TACCGCATCT GCACCAACAC GTGCCTCGAC CTGATCGCGC GGCGGCCCAG GCGCGTGCTG
CCGATCGACC ACGTCGGGGC GGCCGACCCG CACACGCCCG ACGACCAGCC GCTGGTCGAG
ACCGCGGCGT GGATCGAGCC GTACACCGAC GAGCTGGAGG ACGGCCGCGC AGCGCCCGAC
GCCGTCTACG AGCTGCGCGA GACCGTCGAG CTGGCGTTCG TCGCCGCGCT CCAGCACCTG
CCCGCGCGCC AGCGCGCGGT GCTGATCCTG CGGGCGGTGC TCGGCTTCTC GGCGAAGGAG
ACGGCGGAGA CGCTCGGGAC GACGGTCGCG GGCGCCAACG GCGCGCTCGC GCGGGCACGC
GCGGCGGTCG ACGAGCGGCT GCCGCGGGAG AGCCAGCAGG CGACGCTGCG CACGCTCGGC
GACGAGCGGC TGCGCGAGCT GGTCGAGGGC TACACGGCGG CGCTCGAACG CGGCGACGTC
GAGACGCTCG TCGCGCTGTT GACCGAGGAC GCGAGCTGGT CGATGCCGCC GTGCCACAAC
TGGTATCGCG GTCGCGCGGC GATCGCGGAG TTCCTGCGGC TCGGCCCGCT GCGCGAGCGC
TGGCGCCACC TCTCCACGCG CGTCAACGGC CAGGCGGCGG TCGCCTGCTA CGCCTGGAGT
CCCGAGCGTC AGCGCTTCGC CGGCACCGTC GTCGACGTGC TGACCGTGCG CGGCGACCGG
ATCGCCGACG TGACCGCGTT CATCGGCCCG GAGACGTTTC CGCGTCTGGG CCTGCCGGCG
GAGCTGCCGG CGTAG
 
Protein sequence
MITHAGVPTI REQRLLAAAQ GGDEGAYRGL VEPFRRELHA HCYRMLGSVH DAEDALQDAL 
LRAWRGLPRF QARSSLRAWL YRICTNTCLD LIARRPRRVL PIDHVGAADP HTPDDQPLVE
TAAWIEPYTD ELEDGRAAPD AVYELRETVE LAFVAALQHL PARQRAVLIL RAVLGFSAKE
TAETLGTTVA GANGALARAR AAVDERLPRE SQQATLRTLG DERLRELVEG YTAALERGDV
ETLVALLTED ASWSMPPCHN WYRGRAAIAE FLRLGPLRER WRHLSTRVNG QAAVACYAWS
PERQRFAGTV VDVLTVRGDR IADVTAFIGP ETFPRLGLPA ELPA