| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_3256 |
|---|
| Symbol | |
|---|
| ID | 8733705 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 3464097 |
|---|
| End bp | 3464966 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 646503873 |
|---|
| Product | diaminopimelate epimerase |
|---|
| Protein accession | YP_003395049 |
|---|
| Protein GI | 284044709 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0253] Diaminopimelate epimerase |
|---|
| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.220746 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.198533 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGTTCG AGAAGTGGCA GGCGCTCGGC AACGACTACG CGATCGTCGA GCAGAGAGAC
CTCCCGTTCG AGCTGACGCC CGCACGGATC CGCGCCTTCT GCGCCGGGCA CTTCGGCGTC
TTCGCCGACG GGATCCTGCT GCTGTCCGAG AGCGACCAGC CCGGCTTCGT CGCGGACCTG
AAGATCTACA ACCCCGACGG CTCCGAGGCC GAGCTGTCCG GCAACGGCGC GCGCGAGGCG
ATCATGTACC TGCGCCAGCG CGGCTGGACC GACGCGGACG AGTTCTCGAT CCAGACCGCG
GCCGGCGAGA TCCGCCCGAC GATCACCGGG CCGGCGACCT GCAAGGTCGA CATGGGGCGC
GCGAAGCTGA CGTCGAAGGA CTTCCCCTCC GGCCCGGACG ACGGCAGAGC GCAGCTGACC
GCCGGTCAGC ACCAGTGGAG CTTCCAGCAC GTCTCGATCG GCAACCCGCA GTGCTCGATC
CGCGTCGACT CGCTCGAAGC GCTCGACGCG CTCGACCTGC CCGCGATCGG CGGTGCGATC
GAGCACCACG AGCGGTTCCC CAACCGCACG AACGTCTCCT GGTACGCCGA GCTGGCACCC
GACCGCATCC GCGCGCGGAT CTTCGAGCGC GGCGTCGGCG AGACGCTGTC GTCCGGCACC
GGCGCGACCG GCGCCGCGGT CGCGCACGTG CTGCGCGGCG GCGGGGGAGA CGATCCGGAC
ACCTCGACCG TGACCGTCGT GCTCGACGGC GGCGAGCTGG AGGTCGAGGT GGCCGAGGAC
CTGCACGTGA ACCTGACCGG CTGGGCCGTT CCCGTCTTCG GCGGAACGCT CTCCGAGACC
TTCCTGAAGG AGCTGCATGA GACCGAGTAA
|
|---|
| Protein sequence | MKFEKWQALG NDYAIVEQRD LPFELTPARI RAFCAGHFGV FADGILLLSE SDQPGFVADL
KIYNPDGSEA ELSGNGAREA IMYLRQRGWT DADEFSIQTA AGEIRPTITG PATCKVDMGR
AKLTSKDFPS GPDDGRAQLT AGQHQWSFQH VSIGNPQCSI RVDSLEALDA LDLPAIGGAI
EHHERFPNRT NVSWYAELAP DRIRARIFER GVGETLSSGT GATGAAVAHV LRGGGGDDPD
TSTVTVVLDG GELEVEVAED LHVNLTGWAV PVFGGTLSET FLKELHETE
|
|---|
| |