Gene Cwoe_3187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_3187 
Symbol 
ID8733635 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp3395236 
End bp3397380 
Gene Length2145 bp 
Protein Length714 aa 
Translation table11 
GC content67% 
IMG OID646503804 
Product(p)ppGpp synthetase I, SpoT/RelA 
Protein accessionYP_003394981 
Protein GI284044641 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases 
TIGRFAM ID[TIGR00691] (p)ppGpp synthetase, RelA/SpoT family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.190275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAGATCG ACCGCGAGCA GGTCGAGCGC GCGTTCGTCT ACGCCTGCGA GCACCACGCC 
GACCAGCGGC GCAAGTCGGG CGAGGAGTTC ATCATCCACC CGGTCGGGGT GGCGAAGATC
TGCGCCGGCA TGCGGCTCGA CACCGAGACG CTCGTCGCCG CGCTGCTGCA CGACACCGTC
GAGGACACCT CCGCGTCGCT GGAGGACGTC CAGGACAAGT TCGGCGAGGA GATCGCCGGG
CTGGTCGACG GCGTCACCAA GCTCACCGGC CTGACCTTCT CCTCGCGCGA CGAGGCGCAG
GCGGAGAACT ACCGCAAGAT GATGGTCGCG ATGGCCTCCG ACATCCGGGT CATCCTGATC
AAGCTCGCCG ATCGGCTGCA CAACATGCGC ACGATCGAGG CGATGCCGAA GCAGAAGCAG
ATCGAGAAGG CGAAGGAGAC GCTGGACATC TACGCGCCGA TCGCGCATCG GCTCGGCATC
CACGCGATCA AGTGGGAGCT GGAGGACCTC GCGTTCGCCA CGCTGCACCC GCGCAAGTAC
ACCGAGATCA AGGGCCTCGT CAACCAGCAG CGGACCGAGC GCGAGCGCTA CGTCAACGAG
GCGGGCGCGT TCGTCTCCAA GGAGCTGGAC GCGCTCGGCA TCCACGCCGA GATCTCCGGC
CGCGCGAAGC ACTTCTACTC GATCTACTCG AAGATGACGA GAAAGGGTCG CGAGTTCAAC
GAGATCTACG ACCTCACCGC GATGCGCGTG ATCGTCGACT CGGTGAAGGA CTGCTACGGC
GCGGTCGGCG TGATCCACTC GCTCTGGAAG CCGCTGCCCG GCCGCTTCAA GGACTTCGTC
GCGATGCCGA AGTTCAACAT GTACCAGTCG CTGCACACGA CCGTGATCGG GCCGGAAGGG
CGCCCGCTGG AGATCCAGAT CCGCACGCGC GAGATGCACG ACATGGCCGA GTTCGGCATC
GCCGCGCACT GGATCTACAA GCAGGACCCG ACCTCCAGCG AGGGCGACGG CAAGCTCAAG
TGGCTGCGGC GCCTGCTCGA CTGGCAGCAG GAGATGTCGG ACCCCAAGGA GTTCATGGAC
ACCTTGAAGG TCGACCTCTT CGAGGACGAG GTGTTCGTCT TCACGCCGAA GGGCGAGGTG
AAGTCGCTGG CCGCGGGCGC GACGCCGCTG GACTTCGCCT ACGAGGTCCA TACCGACGTC
GGCCACCGCA CCGTCGGGGC GAAGGTCAAC GGCAAGATGG TCCCGCTCTC GTACGAGCTG
CGCTCGGGCG ACATCGTCGA GGTGATGACC TCCAAGCGCG AGCGCGGCCC CTCGCGCGAC
TGGCTCGCGC TCGTCAAGAC GACGCGCGCC CGCAACAAGA TCAAGCAGTG GTTCAAGAGC
GAGTCGCGCA AGGACACCGA GCACGCCGGC CGCGAGCTGC TGCAGGAGCA CCTCAAGAAG
CAGGGCCTGC CGGCGCAGCG GATCGTCGGC TCACCGCTGC TCGCAGACAT CATCCGCGAG
ATGGGCTTCC GCAAGGGCGA CGAGTTCTAC ATCGCGCTCG GCGCGGCGAA GATCTCGCCC
AGAACGGTCG TCAACAAGGT CATGCAGCGG CTCAAGCAGG GCGAGGCCGC CGAGGGCACG
CCGACGGCGG CCGACGACCT GCTGAAGACC AACCCACAGC GCGAGCGGCG CCCGACGACC
TCCTCGACCA AGTTCGGCAT CTCGGTCGAC GGCGTCGGCG ACGTGATGCT GCGGCTGGCG
AAGTGCTGCC GGCCGGTCCC CGGCGACCCG ATCGTCGGCT ACGTCTCGCT CGGCCGCGGG
ATCACGATCC ACCGCGAGGA CTGCCCGAAC GTGCAGACGC TGCGCAAGGA CCCGGACCGC
TTCACGCCGG TCTCGTGGGA CGGAGAGGCG GCGACGTCGT TCAAGGTCGA GATCCACATC
GACGGCTGGG ACCGCCATCG CCTGCTGGAA GACCTCGCCA GGACCTTCAG CGAGGCGGGG
ATCAACATCG TCGACGCGCG TTGCACTTCG AACCCGCCGA TGATCCGCAA CCGCTTCGTG
ATCGAGGTCG CCGACACCAA GACGCTCGAC ACCACGATCA CCAAGCTGCG GAACATCGAG
GCGGTCTTCG ACGCCTACCG CGTAACGCCC GGCGCGGGCG CCTGA
 
Protein sequence
MEIDREQVER AFVYACEHHA DQRRKSGEEF IIHPVGVAKI CAGMRLDTET LVAALLHDTV 
EDTSASLEDV QDKFGEEIAG LVDGVTKLTG LTFSSRDEAQ AENYRKMMVA MASDIRVILI
KLADRLHNMR TIEAMPKQKQ IEKAKETLDI YAPIAHRLGI HAIKWELEDL AFATLHPRKY
TEIKGLVNQQ RTERERYVNE AGAFVSKELD ALGIHAEISG RAKHFYSIYS KMTRKGREFN
EIYDLTAMRV IVDSVKDCYG AVGVIHSLWK PLPGRFKDFV AMPKFNMYQS LHTTVIGPEG
RPLEIQIRTR EMHDMAEFGI AAHWIYKQDP TSSEGDGKLK WLRRLLDWQQ EMSDPKEFMD
TLKVDLFEDE VFVFTPKGEV KSLAAGATPL DFAYEVHTDV GHRTVGAKVN GKMVPLSYEL
RSGDIVEVMT SKRERGPSRD WLALVKTTRA RNKIKQWFKS ESRKDTEHAG RELLQEHLKK
QGLPAQRIVG SPLLADIIRE MGFRKGDEFY IALGAAKISP RTVVNKVMQR LKQGEAAEGT
PTAADDLLKT NPQRERRPTT SSTKFGISVD GVGDVMLRLA KCCRPVPGDP IVGYVSLGRG
ITIHREDCPN VQTLRKDPDR FTPVSWDGEA ATSFKVEIHI DGWDRHRLLE DLARTFSEAG
INIVDARCTS NPPMIRNRFV IEVADTKTLD TTITKLRNIE AVFDAYRVTP GAGA