Gene Cwoe_3080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_3080 
Symbol 
ID8733526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp3285533 
End bp3286396 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content73% 
IMG OID646503695 
Producthemolysin A 
Protein accessionYP_003394874 
Protein GI284044534 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1189] Predicted rRNA methylase 
TIGRFAM ID[TIGR00478] hemolysin TlyA family protein 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACTCG ACACGCTGCT CGCGGAGCGA GGCGTCTTCG CCTCACGTTC GCGTGCGGCC 
GCGTCCGTGC TCGCCGGCGA GGTGCTGCTC GGAAGCGACC GCCGCCGTGC CGAGAAGCCC
GGCCAGCTGG TCCCCGCCGA CGTCGAGGTC GACGTCGCCG AAGCGCCCGA CTTCGTCTCG
CGCGGCGGAC GCAAGCTCGC CAACGCGCTC GACGCGATCG GGCTCGACGT CGCCGGTCGC
CGCGCGCTCG ACGTCGGCGC TTCGACGGGC GGCTTCACCG ACTGCCTGCT CCAGCGCGGC
GCCGCGCACG TCGTCGCGCT CGACGTCGCC TACGGCGAGC TGCACTGGAA GATCCGCAAC
GACGAGCGCG TGACGGTGCT GGAGCGCGCC AACGCCCGCC GCGTCGAGCG CGAGCAGCTG
CCGTACGCGC CGGACCTGCT CGTCGCCGAC GTCTCGTTCA TCTCGTTGAC CAAGGTCCTG
CCGGCGGTGT TGGCGACGAT GGACGAGCGC TTCGACGGCC TCGTGATGGT CAAGCCGCAG
TTCGAGGTCG GGCGTGAGCG CGTCGGCAAG GGCGGTGTCG TGCGCGACGC CGCCGACCGC
CGTGCCGCGC TCGTCGCGGT CGGCGAGGCG GCGCACGCGC TCGGCGCATC CGTGCTCGGC
TTCGTGTCGT CAGGCCTGCC CGGCCCGAAG GGCAACAGGG AGACGTTCGT GCGGCTCGCC
GAAGGCGGTC GCGCGGGCGC GCTCGACGAG CTGGACTCCG CGGCCCGGGA GGTCGAGGCG
GAACCCGCGG CCAGAGGCCT TGGTTCCGTC GGAAGAACTC GCCCGGAGGC TCGTTCTTCC
GGGCTGGAGG AGAACGATGA GTAG
 
Protein sequence
MRLDTLLAER GVFASRSRAA ASVLAGEVLL GSDRRRAEKP GQLVPADVEV DVAEAPDFVS 
RGGRKLANAL DAIGLDVAGR RALDVGASTG GFTDCLLQRG AAHVVALDVA YGELHWKIRN
DERVTVLERA NARRVEREQL PYAPDLLVAD VSFISLTKVL PAVLATMDER FDGLVMVKPQ
FEVGRERVGK GGVVRDAADR RAALVAVGEA AHALGASVLG FVSSGLPGPK GNRETFVRLA
EGGRAGALDE LDSAAREVEA EPAARGLGSV GRTRPEARSS GLEENDE