| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_2876 |
|---|
| Symbol | |
|---|
| ID | 8733320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 3071485 |
|---|
| End bp | 3072303 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 646503489 |
|---|
| Product | HhH-GPD family protein |
|---|
| Protein accession | YP_003394670 |
|---|
| Protein GI | 284044330 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1194] A/G-specific DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR01084] A/G-specific adenine glycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0048727 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCGGCG TGCCGGTCGA CGCTGACGCG ATCCTCTCCT GGTACGGCGC GGTCCGACGC
GACCTGCCGT GGCGGCGGAC GACAGATCCG TATCGCATCC TCGTCTCGGA GGTGATGCTC
CAGCAGACGC AGGTCGCGCG TGTGGTCCCC TACTACGAGG CGTTCCTGGA GCGCTTCCCG
GACGAGGTCG CGCTCGGCTC CGCGCCGACC GCCGACGTCC TGCGACTGTG GAGCGGCCTC
GGCTACAACC GTCGCGCGCT CGCGCTGCAG GCATGTGCTC GCGCTGTCGC GCGCGACGGC
TGGCCGCGCG CCGCGGAGGG GCTGCGAGCG TTGCCGGGGA TCGGGCCGTA CACGGCCGCG
GCGGTCGCCT CGTTCGCGTT CGGCGAGCAG GTCGCCGCCG TCGACACCAA CGTCAGACGC
GTGATCGAGC GCGTCGACCG CGCTCACCGC ACGCCGCGCC CGCTCGCGGC GCGCGCGGCT
GAGCTGCTGC CCGCCGGCCG TGCGGCCGAC TGGAACCAGG CGATGATGGA GCTGGGCGCG
ACCGTCTGCA CCGCCCGCTC GCCCGGCTGC GACGCGTGCC CCGTCACCGG CTGCCGGTCG
CGCGGGCGCC CGCTCCCACC GCCACCGGCC AGACGCGCCC GTGGCGCGCA GCGCTTCGAG
GAGACCGACC GCTTCGTCCG CGGGCGGATC GTCGCGGCGC TCGCGGCGGG CGAGGAGCTG
CCGCGCGGGA TCGCCGCCGA GCGGATCGAG CGCGCACTCG CCGGCCTCGC GCGCGACGGG
CTCGTCGTCC GCGACGGCGC CGCGGTCCGC CTGCCGTAG
|
|---|
| Protein sequence | MRGVPVDADA ILSWYGAVRR DLPWRRTTDP YRILVSEVML QQTQVARVVP YYEAFLERFP
DEVALGSAPT ADVLRLWSGL GYNRRALALQ ACARAVARDG WPRAAEGLRA LPGIGPYTAA
AVASFAFGEQ VAAVDTNVRR VIERVDRAHR TPRPLAARAA ELLPAGRAAD WNQAMMELGA
TVCTARSPGC DACPVTGCRS RGRPLPPPPA RRARGAQRFE ETDRFVRGRI VAALAAGEEL
PRGIAAERIE RALAGLARDG LVVRDGAAVR LP
|
|---|
| |