Gene Cwoe_1991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_1991 
Symbol 
ID8732433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp2092465 
End bp2093046 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content77% 
IMG OID646502609 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003393792 
Protein GI284043452 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.91155 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.460145 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGGATCC GCAGACGAAC CGCCGAGCGC AGCCCGGCAG CCCGCCCGCG CGACGCGCGC 
TGGGCGGTCT ACGAGCAGCA CGCGCAGGCG ATCCGCGCCT ACGCCGCGCG GCGCGTCGAG
CCCGACGCCG TCGACGATGT CGTCGCCGAG ACGTTCGCGA TCGCGTGGCG CAAGCTGCCG
CGCGAGGCCG ATCCGCTGCC GTGGCTGTAC GCGGTCGCGC GGCGCGTCGT CCACGGTCAC
CGCCGCAGCC ATGCGCGCCG CGGCGCGCTG CTGGCGCGCG CGATCAGCGG CTACGCGACC
GAGGCGCCCG CGCCCGACCC CGCCGACCAG GTCGGCGGCG GGTACGACCC GGCGCTGATC
CGCGCCTTCG AGCAGCTGAC CGAGACCGAG CGCGAGGCGG TCCGCCTGAT CGCGTGGGAA
GGACTCGAAC ACGCCGATGC GGCGCGCGCC GCCGGCTGCT CGCGCGCGAC GTTCGCGGTA
CGGCTGTCAC GGGCGCGTGT GCGGCTGCGG ACCGCGCTCG AACAGGAGGC GGCCGCCGCT
GGGGCGCTCG CCGCCGCACC GAACATGGAG GTCGTCCGAT GA
 
Protein sequence
MRIRRRTAER SPAARPRDAR WAVYEQHAQA IRAYAARRVE PDAVDDVVAE TFAIAWRKLP 
READPLPWLY AVARRVVHGH RRSHARRGAL LARAISGYAT EAPAPDPADQ VGGGYDPALI
RAFEQLTETE REAVRLIAWE GLEHADAARA AGCSRATFAV RLSRARVRLR TALEQEAAAA
GALAAAPNME VVR