| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_1939 |
|---|
| Symbol | |
|---|
| ID | 8732380 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 2042424 |
|---|
| End bp | 2043191 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 646502556 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003393740 |
|---|
| Protein GI | 284043400 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGGCTTG CCGGCAAGGT CGCGCTCGTG ACGGGCGCCG CGCGACGGCG CGGGATCGGG
CGCGGGATCG TCGAGGCGCT CGCGGCCGAG GGGGCGGTCG TCGCGGTCAA CGACGTCGCC
GCCGAGGAGG AGGCGGCGGA GCTGATCGCC CGGCTCGCCG CGGAGGGCGC GACCGCACGC
TTCTATCCCG CCGACGTGAC CGACCGCGGT GCCGTCGAGC GGATGCTGGA CGCGATCGAG
CGCGACCTCG GCCCGCTGCA CGCGGTCTGC TCCAACGCCG GCATCACGCG CTGGGCGCCG
TTGGAGGAGA TCGTCGACGA CGACTTCGAC GCGATCGTCG CGGTCAACCT CACCGGCGGG
TTCAACGTCG GCCAGGCCGC GGCGCGGCGG ATGGTCGCGA GCGGCACGCG CGGGCGGATC
GTCTTCACGT CCTCGGTGCA CGTGCAGATG CCGTTCAGGG GCGGCGCGAT CTACGGCGCG
ACCAAGCAGG GGCTGCGAGC GCTCGCCGAG ACGCTCGCGC TCGAGCTGGC TCCGCGCGGC
ATCACCGTCA ACCACCTCGG GCCCGGCTGG GTCAAGAGCG ACCTCGGCGC CGGACCCGCG
CTCGACCCGG AGGTCGAGCG CGCTGTGCTC GCGCAGATCC CCGCGGGCCG CGAGGCGCAG
CCGATCGAGA TGGGCAGGGC GGTCGCGTAC CTGTGCTCCG ACGACGCCGC CTACGTCACC
GGCGAGTTCC TCCGCGTCGA CGGCGGCTAC GTCGTGGGGA AGTACTGA
|
|---|
| Protein sequence | MRLAGKVALV TGAARRRGIG RGIVEALAAE GAVVAVNDVA AEEEAAELIA RLAAEGATAR
FYPADVTDRG AVERMLDAIE RDLGPLHAVC SNAGITRWAP LEEIVDDDFD AIVAVNLTGG
FNVGQAAARR MVASGTRGRI VFTSSVHVQM PFRGGAIYGA TKQGLRALAE TLALELAPRG
ITVNHLGPGW VKSDLGAGPA LDPEVERAVL AQIPAGREAQ PIEMGRAVAY LCSDDAAYVT
GEFLRVDGGY VVGKY
|
|---|
| |