| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_1878 |
|---|
| Symbol | |
|---|
| ID | 8732319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 1976283 |
|---|
| End bp | 1978190 |
|---|
| Gene Length | 1908 bp |
|---|
| Protein Length | 635 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 646502495 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003393679 |
|---|
| Protein GI | 284043339 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.154844 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0838621 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGGGAGC CGCGCGTCGT CGTGGCGCTG CTCGCCGCGG GGGTGGCGGT CTGCGTCGCG
GCGGGCGCTC CGGCCGCCGC CGGCGCCGCC GGGACGACCG AGCGCGTCAG TCTCGGCGCG
GGCGGCGCGC AGCTCTTCGA CGACAGCTGG GGACCGAGCG TCAGCGCGGA CGGGCGCTGG
GTCGCGTTCG TCAGCACGGC CGCGAATGCC GTTCCCGGCG ACACGAATGT GCGCTCGGAC
GCCTTCCTGC GCGACCGCGT CACGGGCGAG ACGCGCCGCA TCTCGGCCCG TGCCGACGGC
ACGCAGGGGA ACGAGGACTC GGACTCGGTG CCGTTCGGCT CGGTCGCGTT CGCGCCCGTC
TTCGCGGAGA CGTCGATCAG CGACGACGGC CGCTACGTCG CGTTCACCAG CTTCGCGACG
AACCTGGCCA CCGCCGGCGC GACGAACGTC TGGAGCGACG TCTTCCTCTA CGACCGCGTC
GCGAACACGC TCAGACGGCT CAGCACGAGC GTCGGCGGCG ACGACGGCAG AGGCGACTCG
TTCGACGCCC ACGTCGCGCC GGATGGCACG CACGTCGTCT TTGCGAGCGT CGCGGCCGAT
CTCGTCACGA CGAACAACGT CCCGCGGGAC GTCTTCCTCG CCGACGTCGC GACGGGCGCG
CTGACCCGCG TCGGCGAGGC GCCCGGGGGC AGAAGAGCGA CCGCCGGCAG CGACACGGGG
GACGTCAGCG CCGGCGGTCG CTTCGTCGCG TTCTCCAGTC ACGCCTCCAA CCTCGTCGGC
GGCGACGGCA ACGGCCGCGA GGACGTGTTC GTGCGCGAGA CCGCGACGGG CGGGATCGAG
CGCGTCAGCG TGAGCGCGAG CAGCAGCGAC GCCAACGGCG GCTCCGAGCG GCCGTCGATC
AGCGCCGACG GCTGCCTCGT CGCGTTCGTC TCGGACGCGA CGAACCTCGT CTCGCCGCCG
ACCGCGGCGG GCGACCGCGT CTTCGTCCGC AACCGTTGCG CCGGCACGAC GGAGCTGGCG
AGCGTGTCGG CCGCAGGCGC GCCGGGCGAC ACCGAGGGCT ACCTGCCCCC GGCGATCTCC
GGCGACGGCT GCGCGGTCGC ATTCGTCGGC CCCGCGCTGG TCGGCGGGCT GGCGCTGCGC
GATCGCTGCG CCGGCGCGAC GACGCGCGCG GACCTCGCGA CGGGCGGTGC CGGCGGCAAC
GCCGTGCCCG GCCGGTACGC GTTCAGCGGC GGCACGGGCC GTCACCTCGC GTTCGACAGC
CGCGCGTCGA ACCTCGTCGT GGGGGACACG AACGGCGACG TCGACGTGTT CGTGCGCGAC
CGCGAGGGGA GCCCGCCGCC CGGCGGCGGA GGTGGCGGCA GAGAAGGGGG CGGAGGGGGC
GATCCCGCTC CGGCGCCTTC GCCGGGCGGC GGGAGCGGAG CGGGCGGCGC GGGCACGGGC
GGGGGCGCGG GCTCGGCACC GGGCGGCTCC CGGCCGGGCG CTGCGAGACC GCTCGCGCTG
CGGCTCTCCG GCGTCGGCCT CTCGCGGACG CGCTTCGCGG TGCTGCCGCG CGGTTCGCGC
GTGACGCGCG GGCGCGGTGC GCGCCTGATG CTGACGGCGA GCGAGCCCGC GACGCTCTCG
CTCCGCTACG CGCGCGTCGT CGCTGGCCGC CGGGTCGGCC GTCGCTGCGT CGCGGGGGCC
GGCCGCGGCC GGCGCTGCAC GAGCATGCGC GCCGCCGGCG GCGCGAGCGC CGTCCTGCGC
GCCGGCCGCA ACACGATCGC GCTCACAGGA CGGATCGGGC GCGCACGGCT CGCGCCGGCG
ACCTATCGCC TGACGCTCGT CGCACGGACA CGCGACGGGC GGACCTCGGA AACCGTCGCG
CGGACGCTGA CGATCACGCG CGCGGCGGCG GGGAGGCCGC CGCGGTGA
|
|---|
| Protein sequence | MREPRVVVAL LAAGVAVCVA AGAPAAAGAA GTTERVSLGA GGAQLFDDSW GPSVSADGRW
VAFVSTAANA VPGDTNVRSD AFLRDRVTGE TRRISARADG TQGNEDSDSV PFGSVAFAPV
FAETSISDDG RYVAFTSFAT NLATAGATNV WSDVFLYDRV ANTLRRLSTS VGGDDGRGDS
FDAHVAPDGT HVVFASVAAD LVTTNNVPRD VFLADVATGA LTRVGEAPGG RRATAGSDTG
DVSAGGRFVA FSSHASNLVG GDGNGREDVF VRETATGGIE RVSVSASSSD ANGGSERPSI
SADGCLVAFV SDATNLVSPP TAAGDRVFVR NRCAGTTELA SVSAAGAPGD TEGYLPPAIS
GDGCAVAFVG PALVGGLALR DRCAGATTRA DLATGGAGGN AVPGRYAFSG GTGRHLAFDS
RASNLVVGDT NGDVDVFVRD REGSPPPGGG GGGREGGGGG DPAPAPSPGG GSGAGGAGTG
GGAGSAPGGS RPGAARPLAL RLSGVGLSRT RFAVLPRGSR VTRGRGARLM LTASEPATLS
LRYARVVAGR RVGRRCVAGA GRGRRCTSMR AAGGASAVLR AGRNTIALTG RIGRARLAPA
TYRLTLVART RDGRTSETVA RTLTITRAAA GRPPR
|
|---|
| |