Gene Cwoe_1860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_1860 
Symbol 
ID8732301 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp1958799 
End bp1959824 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content75% 
IMG OID646502477 
ProductHistone deacetylase 
Protein accessionYP_003393661 
Protein GI284043321 
COG category[B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0555119 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0138498 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCCCG CGGTCTACCT CTCGCACCCC TCGTCGCTCG CGCACGACAC TGGCGCGCAC 
CCCGAGCGGG CGGCGCGGAT CATCGCGATC GAGCAGGAGC TGGAGCGCCG CGGTTGGCTC
GGGCTGGAGC GCCTGGAGGC CCCGATCGTG CAGGAGTCCA CGCTCGCCGC GGTCCACCCG
GTCCGCTACA TCCGCGCGAT CGACGAGCTG TGCGCCGCCG GCGGTGGCGC GATCGATGCC
GACACCGTCG TCGTCGAAGG TTCCTACGAG GCGGCGCTGC GCGCGGCCGG CGGCGCGGTC
CGGCTCGTCG ACCTGCTGCT GGGCGGCGGC GCGCGGACGG GTTTCAGCGC GCTGCGGCCG
CCCGGCCACC ACGCCGAGGC GGCGCGCGCG ATGGGCTTCT GCCTGTTCGG CAACGTCGCC
GTCGCCGCGC GGCACGCGCT CGACGCGCAC GGCGCCGAGC GGGTGCTCGT GCTCGACTGG
GACGTCCACC ACGGCAACGG CACCAACGAC ATCTTCCACG CGACCGACGA GGTCCTGTTC
GTCTCGCTGC ACGAGTCGCC GCTCTACCCC GGAACGGGTC CCGTCGGCGA CGTCGGCAGC
GGCAGAGGAA CCGGCTACAC GGTCAACGTG CCGGTCGCCG CCGGCACCGG CGACGCGACG
TACGCGTCAC TGCTGGAGCA CGTCGTCGTG CCGCTCGCGC GTGCATACGA GCCGCGCCTG
ATCCTGCTGT CGGCCGGCTT CGACGCCCAC CGCGACGACC CGCTCGCCGG CGTGCGGCTG
AGCGAGGGCG GCTTCGCCGC GATGACGGGC ACGATCCGCC GGCTCGCGGC GGAGCTGGAG
GTGCCGGTCG GCGGCGTGCT GGAGGGCGGC TACGACCTCG GTGCGCTGGC CGCCTCGACC
GCCGCGACGC TCGACGTGCT GAGCGCTCCG GAGCCGCCGC CAGCGGTCGA AGACGTGCCG
GTCGCGCCGG AGTCGCGCGC GGCGCTCGAA CGGCTGGCCG CGCGCTGGCC GGCGTTGACC
GTCTGA
 
Protein sequence
MEPAVYLSHP SSLAHDTGAH PERAARIIAI EQELERRGWL GLERLEAPIV QESTLAAVHP 
VRYIRAIDEL CAAGGGAIDA DTVVVEGSYE AALRAAGGAV RLVDLLLGGG ARTGFSALRP
PGHHAEAARA MGFCLFGNVA VAARHALDAH GAERVLVLDW DVHHGNGTND IFHATDEVLF
VSLHESPLYP GTGPVGDVGS GRGTGYTVNV PVAAGTGDAT YASLLEHVVV PLARAYEPRL
ILLSAGFDAH RDDPLAGVRL SEGGFAAMTG TIRRLAAELE VPVGGVLEGG YDLGALAAST
AATLDVLSAP EPPPAVEDVP VAPESRAALE RLAARWPALT V