Gene Cwoe_1770 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_1770 
Symbol 
ID8732211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp1865298 
End bp1867607 
Gene Length2310 bp 
Protein Length769 aa 
Translation table11 
GC content73% 
IMG OID646502388 
Productdiguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 
Protein accessionYP_003393572 
Protein GI284043232 
COG category[T] Signal transduction mechanisms 
COG ID[COG2200] FOG: EAL domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0395066 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.809527 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGTCGC AGAACGGCCC TACGCGCGTG AGCGCGCTCG TCCGCGAGGC GGTGCCGTTC 
GCGGTCGGCG CGGTGCTCGC GATCGCGCTC GTGCCGCTGT CCTCGCTGCG CGAGGCGTCG
GCGACGTGGC AGCGCGTGCT CGTGCTCGTG GTGCTCGGCA CCGCGATCGG CTGCGCGGTC
CGCTGGCTCG TCGCGCACCT GCGTGCCGGG CAGGATGCGC TCCAGCACGC GCAGGAGCAG
TTCCGGACCG CGTTCGAGGA CGCGCCGATC GGGATCGCCC TGTTCACCGT CGACGGCCGC
TTCACCGAGG TCAACCGCGC CTTCTGCGAG ATGGTCGGCG CGGAGCGCGG GCAGATCGTC
GGGATCAGCG TGCTCGACCA TGTCGCGCCC GCCGACCGGC CCGACTCGCT CGCCGCCTTC
CGCGCGCTCG TCGCCGGCGA GCGGACGACC TTCCACGCCG AGCAGCGCCT GCGCCGCGCC
GACGGGCGCG AGGTCTGGTG TGCGCTGCGC GCCTCGCTCG TGCGTGACGG CGCCGGTGAG
CCGTTGCACT TCATTGTCCA GATCGAGGAC GTCAGCGCCC GCCGTCGCGC GGCCGAGGCG
CTCGCCGAGG CGGAGGAGCG CTTCCGGCTC GCGTTCGAGG GGGCGCCGAT CGGGATCGCG
CTCGCCGACC TCGACGGCCG CTTCCTGCGC GTCAACGACG CGCTCTGCGA GATCACCGGC
TACACCGAGG CGGAGCTGCT TGCGGCCAAC GTCGACCTGC TCGGCCACTC CGACGCGGCC
GACGCCGAGG CCGAGCACGT CGACCGGCTG ATGCGCGGCG AGATCCGCTC CTACCGCCTG
GAGCGCCGGA TCGTCCACGC GACCGGCCGC AGCGTCTGGG TCAGCCTCAG CGTCTCGCTC
GTGCGCGACA GCTCCGGAGT GCCGCGCTAC TGCATCAAGC AGCTGGAGGA CATCTCGGAC
CGCAAGCGGT TCGAGGGCCA GCTCGCCTAC CTCGCCGACC ACGACGCGCT GACGGGCCTC
TACAACCGCC GCGCGTTCCA GCGCGAGCTG GAGCAGCGCA CCAGCGAGGA CGGCAGAGGC
GGCGCGGTCG TGGTGATAGA CCTCGACCAC TTCAAGGACA TCAACGACAC GCTCGGCCAC
GCCGCAGGCG ACGAGGTGAT CGTGCGCGTC GCGCGGCTGC TCGCCAAGCG CCTGCGCAAG
ACCGACGTGC TCGGCCGGCT CGGCGGCGAC GAGTTCGCGA CGCTGCTGTC GGGCGTCTCG
CGCGAGGAGG CGGAGGCGGT CATCGCCGAG CTGCTGAGAG TCGTGCGCGA GCAGTCGGTC
GTCGTCGAGG GCGGCCATCC GATCGGGCTG ACGGCGAGCG CCGGGATCGC GCTGTTCGAG
GGCGACACCC CGCTGAGCGG CGAGGAGCTG CTCGTCAGCG CGGACATCGC GATGTACGAC
GCGAAGGAAG CCGGCCGCGA CCGCCACGCG ATCTCGGTCG AGACCGAGCA GCGCCAGGCG
CAGATGACCG AGCGGATGGC GTGGTCGCAG CGGATGCGCG ACGCGCTCGA GCACGACGGC
TTCGTGCTGT TCCAGCAGCC GGTCGTCGAC CTCCGCACCG GGCTGCCGAA GTGCCACGAG
CTGCTGCTGC GGATGCGCGG CGACGACGGC GAGCTGATCC CGCCGGCGGC GTTCCTGCCG
ATCGCGGAGC GCTCCGGGCT GATCGCTGAG ATCGACCGTT GGGTGACGCG CCGGGCGATC
GCGACGATCG CGGCGCAGGA GGCTGCCGGG CGACCGCTGC GGCTCGCCGT CAACCTGTCG
GGCGCGTCGG TCTCCGATCC GGGTCTGCTG GAGATCATCG AGGGCGATCT CGCGGCGATG
GCGCCGCCGC CCGGCAGCCT CGTCTTCGAG GTGACCGAGA CCGCCGCGAT CGTCAACCTC
GACCGGGCGC GCGCGTTCGC CGCGACGCTG GCGGAGCTGG GTTGCGAGCT GGCGCTCGAC
GACTTCGGCG CCGGCTTCGG CTCGTTCTAC TACCTCAAGC GCCTGCCGTT CGACTACCTC
AAGATCGACG GTGACTTCAT CCGCCAGCTG ACGTCGAGCC ACGAGGACCA GCTCGTCGTG
CGCGCGATCG TCGAGATCGC GCGCGGGCTC GGCAAGCGCA CGGTCGCGGA GTTCGTCGGC
GACGAGGCGA CGCTGGAGCT GCTGCGCGAG CTGCGCGTCG ACGACGGCCA GGGCTTCCAC
CTCGGCAGAC CTGCGCCGCT GGAGGACCTG ATCGCGGCGC AGAACGCGGC GCCGCCCGCG
GGCAGCTCCA GCACGCACGC CGCGGCGTGA
 
Protein sequence
MKSQNGPTRV SALVREAVPF AVGAVLAIAL VPLSSLREAS ATWQRVLVLV VLGTAIGCAV 
RWLVAHLRAG QDALQHAQEQ FRTAFEDAPI GIALFTVDGR FTEVNRAFCE MVGAERGQIV
GISVLDHVAP ADRPDSLAAF RALVAGERTT FHAEQRLRRA DGREVWCALR ASLVRDGAGE
PLHFIVQIED VSARRRAAEA LAEAEERFRL AFEGAPIGIA LADLDGRFLR VNDALCEITG
YTEAELLAAN VDLLGHSDAA DAEAEHVDRL MRGEIRSYRL ERRIVHATGR SVWVSLSVSL
VRDSSGVPRY CIKQLEDISD RKRFEGQLAY LADHDALTGL YNRRAFQREL EQRTSEDGRG
GAVVVIDLDH FKDINDTLGH AAGDEVIVRV ARLLAKRLRK TDVLGRLGGD EFATLLSGVS
REEAEAVIAE LLRVVREQSV VVEGGHPIGL TASAGIALFE GDTPLSGEEL LVSADIAMYD
AKEAGRDRHA ISVETEQRQA QMTERMAWSQ RMRDALEHDG FVLFQQPVVD LRTGLPKCHE
LLLRMRGDDG ELIPPAAFLP IAERSGLIAE IDRWVTRRAI ATIAAQEAAG RPLRLAVNLS
GASVSDPGLL EIIEGDLAAM APPPGSLVFE VTETAAIVNL DRARAFAATL AELGCELALD
DFGAGFGSFY YLKRLPFDYL KIDGDFIRQL TSSHEDQLVV RAIVEIARGL GKRTVAEFVG
DEATLELLRE LRVDDGQGFH LGRPAPLEDL IAAQNAAPPA GSSSTHAAA