| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_1641 |
|---|
| Symbol | |
|---|
| ID | 8732081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 1729408 |
|---|
| End bp | 1730658 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 646502259 |
|---|
| Product | transcriptional regulator, CdaR |
|---|
| Protein accession | YP_003393444 |
|---|
| Protein GI | 284043104 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3835] Sugar diacid utilization regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.357949 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGGTG GCGGGAATGA CGGCCCGCCA CCCGCCGTGC TGCGTCCTGC GCGCGCCATG
TCCCGGGAGC TGCACCTTCA GCTGATCGGG GCGGTGCTCG GCGGAGAAGG GCTGGCGCGG
GTCGCGCAGC TCGTCTCGGC CGCGGCACGC GCTCCCGTCG CGATCCTCGT CCCGCGCCTC
GCCGTCGCGG CGGCGTTCCC GCTCGCGACC GAGCTGGGCT CGCTGCGCCG CTACGCCGAC
GCGCGCGTCC GCGGCGGCGC CGCGCCACGG CCGCAGGAGC TGGTGGCGGA GGCGGACGTC
GTCGCCGGCG ACGACGTGAT CGGCGTCGTC GCGCTGCTGC GCGGCGCGCA GCTGCCGGCC
GCGGAGGCGG CCGAGCTGCT GCACCTCGCC GCGGTCGCCT CGCTGACGGA GGTCGCCGTG
GCGGAGGCCA AGCGGGAGGT CGAGCAGAAC CTGCGCGGCT CGCTGCTGGA GGAGCTGCTC
AGCAGCGAGG AGGCCGACGC GCGCGAGCTG ACGCGCCGCG CCGCGCGCCT CGGCTGCGAC
CTCTCCCGCG GCGCCGTGGC GCTCTGCGCC GAGCTGGCGG CCGCGGGCGG CGCGGCGGGT
GCAGGCGCAG ACGCGGGCGA GCGGGTCGTC GCGACGATCG CCGACTCGCA CCCCGGTGCG
CTCGCGCAGG CGATCGACGG GCGCGCGTAT GCGATCCTGC CGGCGCTCGC CGCCGCGAAC
GGCGACGGCG AGGAGCCGGC CGCGGGCACG TTGGCGGCCG CGCGGCGGCT CGTGCCGCGG
TTGGAGCCGT ACGGCCGCGC CGGCCTCTCC GGCTTCCAGC CCGACGCGGC GGCGCTGCCG
CGCGCGCTGC GCGAGGCGGA GCTGGTGCTC GACGTGCTGC GGCGCGACGG CGGCGCGACG
TCCGAGGACG TCGGCAGCGG CACCTACCGG CTGCTGTTCC GCGTGCTCGC CTCACACCCG
GACGAGCTGC GCTCCTTCTA CGCCGACACG GCCGCCCCGA TCGTGCGCCA CGACGACCGC
CACGACAGCG GCCTCGTGCG CACGCTCGAG GCGTACCTGG CGCAGGACTG CAACGTCGGC
GCGACCGCCG TCGCGATCGG CGCGCACCGT CACACGGTGG CCCACCGCCT CGACCGCGTG
AAGGAGCTGA CCGGGCTCGA CCCGCTGCGG TCCGAGGACC GCGAGCGGCT CGGGCTCGGG
CTGAAGGCGT TCCGCCTCAT CCGGACTGAC CGGCCAGGAA CTCGTTCGTG A
|
|---|
| Protein sequence | MPGGGNDGPP PAVLRPARAM SRELHLQLIG AVLGGEGLAR VAQLVSAAAR APVAILVPRL
AVAAAFPLAT ELGSLRRYAD ARVRGGAAPR PQELVAEADV VAGDDVIGVV ALLRGAQLPA
AEAAELLHLA AVASLTEVAV AEAKREVEQN LRGSLLEELL SSEEADAREL TRRAARLGCD
LSRGAVALCA ELAAAGGAAG AGADAGERVV ATIADSHPGA LAQAIDGRAY AILPALAAAN
GDGEEPAAGT LAAARRLVPR LEPYGRAGLS GFQPDAAALP RALREAELVL DVLRRDGGAT
SEDVGSGTYR LLFRVLASHP DELRSFYADT AAPIVRHDDR HDSGLVRTLE AYLAQDCNVG
ATAVAIGAHR HTVAHRLDRV KELTGLDPLR SEDRERLGLG LKAFRLIRTD RPGTRS
|
|---|
| |