| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_1555 |
|---|
| Symbol | |
|---|
| ID | 8731995 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 1644915 |
|---|
| End bp | 1646852 |
|---|
| Gene Length | 1938 bp |
|---|
| Protein Length | 645 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 646502173 |
|---|
| Product | glycoside hydrolase 15-related protein |
|---|
| Protein accession | YP_003393358 |
|---|
| Protein GI | 284043018 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.541945 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGA GGGCCGCCCC GAGAAGAGGC CGGCGCGCGA CGCGTCCGTC CGCCCGCTCC
AAGCCGCGCG CGAACGCGAG CAGCCGCCGC AGAGCGCCCG CCAGCTCGCC GTTCCCGCCG
ATCGGCGACT ACGCGTTCCT GTCCGACTGC CACACCGGCG CGCTGATGGC GCCCGACGGC
ACGATCGAGT GGCTGTGCGC GCCGCGCTTC GACTCGCCGA GCATCTTCGG AGCGCTGCTG
GACCGCGGCG CCGGCGGCTT CCGGCTCGGC CCGTACGGCA CGACCGTCCC CGGTGCGCGT
CGCTACGAGC CCGGCACGAA CATCGTCGAG ACGACGTGGA TGACCCAGTC GGGCTGGGTG
ATCGTGCGCG ACGCGCTCGC GATCGGCCCG TGGAGCGACG ACAACAGCGC GGTCACGACG
CGGACGCGGC CGCCGACCGA CGACGACGCC GAGCACATGC TGGTGCGGAC GATCGAGTGC
ATCCAGGGCA GCGTGCAGAT CGAGATGGTC TGCGAGCCGA TGTTCGACTA CGCGCGTGAG
CCGGCCGAGT GGACGGTCGT CGGCGACGGC TACGACGCCG TCGACGCCCA CCACCACACC
GCCTCGCTGC GGCTGACGAG CGACCTGCGG ATCGGGATCG AGGGCAATCG CGCTCGTGCG
CGCCACACGC TGCGGGAGGG CGAGACGCGC TTCGTCGCGC TGTCGTGGGG ACAGGGCCTG
CGCGCGCCGC AGGACGCGGC GGAGGCGACG GCGATGCTGG AGCGCACGTC GCACTTCTGG
CGCGACTGGC TCGACGACGG CCACTTCCCC GACCATCCGT GGCGCGTCTA CCTGCAGCGC
TCGGCGCTGG TGCTGAAGGG GCTGACGTAC GCGCCGACCG GGGCGATGGT CGCCGCGCTG
ACGACGTCGC TGCCGGAGAC GCCCGGCGGC GAGCGCAACT GGGACTACCG CTACACGTGG
ATGCGCGACG CGACGTTCAC GCTGTGGGGG CTGCACGCGC TCGGGCTCGA CTGGGAGGCG
GACGACTTCA TGCAGTTCGT CGCCGACGTG CCGCGCAACC CGGACGGCTC GCTGCAGATC
ATGTACGGCA TCGACGGCGA GAAGGAGCTG ACCGAGCGGA CGCTCGACCA CCTCACCGGC
TACGACGGCG CGCGGCCGGT GCGGATCGGC AACGGCGCCT TCGACCAGCG CCAGAACGAC
GTCTACGGCG CGGTGCTCGA CTCGGTCTAC CTGCACACGA AGGTCGGCGG CCGGCTGCCG
CAGCGGCTGT GGCCGGTGCT CGAGGCGCAG GTTCGCTGCG CGATCGAGGT CTGGGACGAG
CCCGACCAGG GGATCTGGGA GGCGCGCGGC GAGCCGAAGC ACTATGTCTC CTCGAAGCTG
ATGTGCTGGG TCGCGCTCGA CCGCGGCGCG CGGCTGGCGG AGATCCACGG CGAGCCGGAG
CTGGCGGGCG AGTGGCAGGC GGTCGCCGAC CAGATCAAGG CGGACATCCT CGAGCACGGC
GTCCGCGACG GCGTCTTCCG CCAGCACTAC GACACCGACG CGCTCGACGC CTCGACGCTG
CTGGTCCCGC TCGTGCGCTT CCTCGGTCCC GAGGACGAGC GCGTCGAGAG AACCGTGCGC
GCGATCGCGC GCGACCTGAC CGACCACGGC TTCGTGCTGC GCTACCGCAC CGAGGAGACC
GACGACGGCC TCTCAGGCGA GGAGGGGACG TTCCTGATTT GCTCGTTCTG GCTCGTCGCG
GCGCTGGAGG AGATAGGCGA CCATCGCCGC GCGGTGACGC TGCTGGAGCG GCTGCTGGCG
GGCGCCTCGA AGCTCTACCT GTTCGCGGAG GAGCTGGACC CGCACAGTGG GCGGCAGCTC
GGCAACTACC CGCAGGCGTT CACGCACCTC GCGCTGATCA ACGCCGTGAT GCACGTGATC
GAGGGGGAGA CGACCTAG
|
|---|
| Protein sequence | MSERAAPRRG RRATRPSARS KPRANASSRR RAPASSPFPP IGDYAFLSDC HTGALMAPDG
TIEWLCAPRF DSPSIFGALL DRGAGGFRLG PYGTTVPGAR RYEPGTNIVE TTWMTQSGWV
IVRDALAIGP WSDDNSAVTT RTRPPTDDDA EHMLVRTIEC IQGSVQIEMV CEPMFDYARE
PAEWTVVGDG YDAVDAHHHT ASLRLTSDLR IGIEGNRARA RHTLREGETR FVALSWGQGL
RAPQDAAEAT AMLERTSHFW RDWLDDGHFP DHPWRVYLQR SALVLKGLTY APTGAMVAAL
TTSLPETPGG ERNWDYRYTW MRDATFTLWG LHALGLDWEA DDFMQFVADV PRNPDGSLQI
MYGIDGEKEL TERTLDHLTG YDGARPVRIG NGAFDQRQND VYGAVLDSVY LHTKVGGRLP
QRLWPVLEAQ VRCAIEVWDE PDQGIWEARG EPKHYVSSKL MCWVALDRGA RLAEIHGEPE
LAGEWQAVAD QIKADILEHG VRDGVFRQHY DTDALDASTL LVPLVRFLGP EDERVERTVR
AIARDLTDHG FVLRYRTEET DDGLSGEEGT FLICSFWLVA ALEEIGDHRR AVTLLERLLA
GASKLYLFAE ELDPHSGRQL GNYPQAFTHL ALINAVMHVI EGETT
|
|---|
| |