| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_1548 |
|---|
| Symbol | |
|---|
| ID | 8731988 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | - |
|---|
| Start bp | 1637223 |
|---|
| End bp | 1637930 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | 646502166 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_003393351 |
|---|
| Protein GI | 284043011 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.402351 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.239723 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCTGCGC TGCCGCCGTC CGCCGCCGCA GCGGCCGCCG CGGCGTGGTC GCTGCCCGCG
CTCGCCCCCG TCGCCGTCCC GGTCGCGCGC GCCCTCCGCG TCCCGCGTCG CGTCGCGGCT
CCCGGCGTCG CGCTGACGTT CGACGACGGT CCCCATCCAG ACGGCACGCC GGCCGTGCTC
GACGCGCTCG CGGCCGCCGG CGCGCGCGCG ACGTTCTTCC TCGTCGGCGA GCAGGCGGAG
CGCCACCCGG CGCTCGTGCG GCGGATCGTG CGGGAGCGCC ACACGCTCGC GGTGCACGGC
TTCCGCCATC GCTGCCAGCT GCGGCTCTCG CCCGCCGCCG TCGCGCGCGA CGCGGTCCGC
GGGGCGCAGG CGATCGAGCA GGCGAGCGGC GTCCGCTGCG GCCTCTACCG CCCCGCGTAC
GGGATCTTCT CCGCCGGCGG CCTGCGCGCC GTTCGGCGCG CGGGCTTCGA CGTGCTGCTG
TGGTCGCACT GGGGGCGCGA CTGGCGCAAC GCGACCGGCG CGGCGCGGAT CGCCGCGCTG
GCGGCGGCCG CGCCCGCCGC CGGCGACGTG ATCCTGCTGC ACGACTCCGA CGTCTTCAGC
GAGCCCGGCT GCTGGCGTCA GACGGCCGCG GCGCTGCCGG CGATCCTCGC TGCGATCGCC
GGCGCGGGGC TGGCCGCGGA CGCGACCGCC GGCGCGGGTC CGGGCTAG
|
|---|
| Protein sequence | MPALPPSAAA AAAAAWSLPA LAPVAVPVAR ALRVPRRVAA PGVALTFDDG PHPDGTPAVL
DALAAAGARA TFFLVGEQAE RHPALVRRIV RERHTLAVHG FRHRCQLRLS PAAVARDAVR
GAQAIEQASG VRCGLYRPAY GIFSAGGLRA VRRAGFDVLL WSHWGRDWRN ATGAARIAAL
AAAAPAAGDV ILLHDSDVFS EPGCWRQTAA ALPAILAAIA GAGLAADATA GAGPG
|
|---|
| |