Gene Cwoe_1280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_1280 
Symbol 
ID8731719 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp1344935 
End bp1345852 
Gene Length918 bp 
Protein Length305 aa 
Translation table11 
GC content75% 
IMG OID646501898 
ProductRNA polymerase, sigma-24 subunit, ECF subfamily 
Protein accessionYP_003393084 
Protein GI284042744 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0443415 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0743617 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCC GCTGCGAAGA GGAGCTGGCC GCCGCCTTCG AGGACCAGCG GCCCTACCTG 
CGCCGGCTCG CCTACGGCAC GCTCGGCAGC TTCGCCGAGG CGGACGACGT CGTGCAGGAG
GCGTGGCTGC GGCTGCAGCG CACCGACGTC GAGCCGATCA GAGACCTGCG CGGCTGGCTG
ACGACCGTCG TCGGGCGGCT CGCACTCGAC GCGCTCGGCT CGGCCCGCAA CCGGCGCGAG
CGCTACGTCG GCCCGTGGCT GCCGGAGCCG CTGGTCGAGG ACGTCGCCGC GGAGGACCCT
GCCGACCGCG TCACGCTCGA CGAGCAGGTG ACGACCGCGC TGCTGGTCGT GCTCGAACGG
CTCTCGCCGG CCGAGCGGAC GGCGTTCGTG CTGCACGACG TCTTCGGGCT GTCGTTCGCC
GAGGTCGCCG AGGTCGTCGG CCGCAGCCCC GCCGCGGTCC GTCAGCTCGC GGCGCGGGCG
CGGCGCCACG TCGACGACGG CACGCCGCGC TTCCCCGCCT CGCGCGAGCA GCACACGCGC
ATCGTCGCGG CGTTCGCGGT CGCCTGGCAG GCCGGCGACG TCGACGCGCT GCTGGCGGTG
CTCGACCCCG GGGTGACGTT CCGCTCCGAC GGCGGCGGGA ACGTCGTCGC GGTGAGCAGG
CCGGTCGACG GAGCGGAGCG CGTCGCGCGG ACGCTCGTCG CGCTGGCGAC GGCGAACGTC
CGCCGCGGCG TCGCCGTGCG CGGCGGGATC GTCGACGTCA ACGGCCTGCC GGGCCTGCTG
GTCGAGGAGG ACCACGTGCG CGGCGTCGTC TCGCTCACCG TCGACGACGG CCGGATCGTC
GCGATCGACG TCGTCCGCAA CCCCGAGAAG CTGCGGCACG TGCCGGCGCT GCCGGACGCC
GACGCGGGTG AGTCATGA
 
Protein sequence
MIVRCEEELA AAFEDQRPYL RRLAYGTLGS FAEADDVVQE AWLRLQRTDV EPIRDLRGWL 
TTVVGRLALD ALGSARNRRE RYVGPWLPEP LVEDVAAEDP ADRVTLDEQV TTALLVVLER
LSPAERTAFV LHDVFGLSFA EVAEVVGRSP AAVRQLAARA RRHVDDGTPR FPASREQHTR
IVAAFAVAWQ AGDVDALLAV LDPGVTFRSD GGGNVVAVSR PVDGAERVAR TLVALATANV
RRGVAVRGGI VDVNGLPGLL VEEDHVRGVV SLTVDDGRIV AIDVVRNPEK LRHVPALPDA
DAGES