| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_0815 |
|---|
| Symbol | |
|---|
| ID | 8731245 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 853830 |
|---|
| End bp | 854663 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 646501428 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003392623 |
|---|
| Protein GI | 284042283 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGC TGCACGAAGG CTCTCCGCCG GTCACCGCCG GCCGCCGCAC CGCGGATCGC
GCGCTGCGGC TGCTCGGCCG CCTCGGCGTC GCGCTGAGCG TCGCGTTCCT GCTGGCGCCC
GCCGTGGTGA TCGTCGTGCT GTCGTTCTCC GGCGACGACG TGCTCGCGTT CCCACCGAAG
GAATGGGGCT TCCGGCAGTA CTCAGAGCTG TTCTCGTCCG ACATCTGGAT GCCGGCGATC
TGGCTGTCGA TCAAGATCGC GGCGCCGAGC GCGCTGCTGG CGCTGCTGAT CGGCGTGCCG
GCGTCACTGG CGATCGTGCG CTCGCGGCTG CCCGGCCGCT TCGCGCTCCA GATCGGCGGC
ATCGCCGGAA TGATCGTGCC GATCTCCGCC TACGCGGTGG CGATGTACGG CGTCTTCGCC
CAGTTCGAGC TGCTCGGCTC GTTCTGGGGC CTGGTGATCG CCAACTCGAT CCTCGGGCTG
CCGTTCGTGC TCGTGATGGG GACCGCGGCG CTGACGCGCG TCCCGGTCGA GCTGGAGCTG
GTCGCGATCA CGCTCGGCGC GAGCCGCCTG CGCGCGTGGG TCGGGATCAC GCTGCGGCTG
ATGCTGCCCG CGATCTTCGG CGCGGCCGTG CTGGCGTTCG TGACCGCGTT CGACGAGGCG
GTCTTCATCA ACTTCCTCGG CGGCCCCGAC CTGGTGACGA TGCCGAAGGC GATCTTCGAC
TCCGTCCGCT ACGGCGTCGA CCCGGCGATC ACCGCGATCG CGACGCTGCT GATGGTGGCG
ACGGGCGCGC TGATGTCCCT CCCGACCCTC CTGAGAAAGA AGGACCCCAG ATGA
|
|---|
| Protein sequence | MSALHEGSPP VTAGRRTADR ALRLLGRLGV ALSVAFLLAP AVVIVVLSFS GDDVLAFPPK
EWGFRQYSEL FSSDIWMPAI WLSIKIAAPS ALLALLIGVP ASLAIVRSRL PGRFALQIGG
IAGMIVPISA YAVAMYGVFA QFELLGSFWG LVIANSILGL PFVLVMGTAA LTRVPVELEL
VAITLGASRL RAWVGITLRL MLPAIFGAAV LAFVTAFDEA VFINFLGGPD LVTMPKAIFD
SVRYGVDPAI TAIATLLMVA TGALMSLPTL LRKKDPR
|
|---|
| |