Gene Cwoe_0604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_0604 
Symbol 
ID8731032 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp639743 
End bp641350 
Gene Length1608 bp 
Protein Length535 aa 
Translation table11 
GC content71% 
IMG OID646501217 
ProductSerine-type D-Ala-D-Ala carboxypeptidase 
Protein accessionYP_003392414 
Protein GI284042074 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) 
TIGRFAM ID[TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGGC TGAGTGACAA CCGAGTTCTC GCCGTCGCGC TCTCCGTGAG CGCTCTGGGC 
GCCGCAGGAC TGCTCGCGGG CTCGGCAACG GCCGCGCGGC CGTCGGCGAG CGGCAAGGCG
ACCGGCGCCG ACAAGGTCGC CAAGATCATC GCCCGGATCG AAGCCAAGCC GCGGTATCGG
CATGCCGACT GGGGCTTCCA GATCCTCGAC CAGAGAACGG GCGACGTGCT CGGCGCACAG
AACGCGCAGA AGATGTTCGA CCCCGGCTCG ACGATGAAGC TCTACTCGGT GTCGACGGCG
CTGAGCAGAT ACGGGACGAA CTACCGCTTC CGGACCCCGG TCTACCGCCA GGGCACCGTC
TCCGGCGGCA CGCTCGGCGG GAGCCTGGTG CTGGTCGGCT CCGGCGACCT GACGTTGGGA
CTGCGCGCGG AACCGGGCGG CCGGCTCGCC TACGCGAACC TCCCCGCCGT CGACCACAGC
TACGCCGACC AGCTGCCCGG CGCGGTCCTC CCCAAGGGAG ACCCGATGGC CGGGCTCGAC
GAGCTCGCGC GCGACGTGCG CGCTTCAGGC ATCACGCGGG TGAGCGGCGA CGTGGTCGTC
GACGACCGGC TCTTCGCGCC GTACGACGGC TTCCCCGACG GGCTGATCTC CCCGATCTGG
GTCAACGAGA ACCTGGTCGA CCTGCTCGTG AAGCCGGGCG CCGTCGGGCA ACCCGCGTCG
ATCGACCAGC GTCCGCTGAC CGCCTCGTAC ACGGTCGACA ACCGCGTCGT CACCGTGAGA
GCGGGCAAGC CGACGACGCT GAACGTCAGC GAGCCGACGC CGGGCACGAT CGAGGTGACG
GGCCAGATCG CAGCCGGCAG CGGCCCGACG CTGAAGGTGT GGGAGGTCGA CGATCCCGCC
GCGTTCGCCC GCACCGCATT CATCGCGGCG CTCCAACGCG CCGGCGTCAC GGTGACGGCG
ACCGCGACCG GCCCGAACCC CGCGACGCTG CTGCCGCCGA AGGGCAGCTA TCAAGCCGCG
GACAGGGTCG GTGAGCACGT CTCCTCGACG CTCTCCCAGT ACGCGAAGCT GATCTTGAAG
GTCAGCCACA ACCGTGGCGC CGACCTGATG ACCTGCCTCG CCGCGGTCAG ACGCGGAAGC
ACCGACTGCG AGGACGGGTT GACGAGCGAG GTGCAGACCG CGAGCGGTCT CGGCGTGCCG
TACGCGGGCG TGATCCCGAT GGACGGCGCC GGCTCCGACG ATCAGGGCCG CACGACGCCG
GCCGCCCTCG CGACGCTGCT GCGGCACGTG GTCAGAGCCC CGTACGGCAG AGCCTTCGTC
GACGCCCTCC CGATCCTCGG CCGCGACGGC ACGCTCGCGA ACGTCGAGTC GAGATCGCCC
GCCGCCGGCC GCTCCCAGAT GAAGACCGGC AACCGCGTCG TGAGCAACGC GGCCGGCCAG
ATCATCGTGC TCGGCAACAG CCTCGCCGGC TACGCCGAGA CCAAGAGCGG CCGCAGAGTC
GTCTTCATGA TCGCCGTCGG CAACGTCCCG ACGCGCACCG CCGCAGGCTT CTTCAGAGTC
GTCGACGACC AGGCGGCGAT GGTCGTCGCG ATCCAGCAGA ACCTGTAG
 
Protein sequence
MPRLSDNRVL AVALSVSALG AAGLLAGSAT AARPSASGKA TGADKVAKII ARIEAKPRYR 
HADWGFQILD QRTGDVLGAQ NAQKMFDPGS TMKLYSVSTA LSRYGTNYRF RTPVYRQGTV
SGGTLGGSLV LVGSGDLTLG LRAEPGGRLA YANLPAVDHS YADQLPGAVL PKGDPMAGLD
ELARDVRASG ITRVSGDVVV DDRLFAPYDG FPDGLISPIW VNENLVDLLV KPGAVGQPAS
IDQRPLTASY TVDNRVVTVR AGKPTTLNVS EPTPGTIEVT GQIAAGSGPT LKVWEVDDPA
AFARTAFIAA LQRAGVTVTA TATGPNPATL LPPKGSYQAA DRVGEHVSST LSQYAKLILK
VSHNRGADLM TCLAAVRRGS TDCEDGLTSE VQTASGLGVP YAGVIPMDGA GSDDQGRTTP
AALATLLRHV VRAPYGRAFV DALPILGRDG TLANVESRSP AAGRSQMKTG NRVVSNAAGQ
IIVLGNSLAG YAETKSGRRV VFMIAVGNVP TRTAAGFFRV VDDQAAMVVA IQQNL