| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_0568 |
|---|
| Symbol | |
|---|
| ID | 8730996 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 598216 |
|---|
| End bp | 599043 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 646501181 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003392378 |
|---|
| Protein GI | 284042038 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0853398 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAGCA GCGGACGCCG CATCCCCTGG TTGGTGCTGC CCGCGCTCGC GCTGCTCGCC
CTCGGCGTCG TCTACCCCGT CGGGATCAGC GTATGGCGCT CGTTCGCCGA GCAGGACGGG
GGACAGAGCG GCTACGCCTG GATGCTCGGC AACGACGTCT ACGTGACGAT CCTGCTGCGC
ACGTTCGCGA CGGCGCTGCT GACGACGCTC GTCTGCCTGC TCGTCGCGTA CCCGTACGCG
TACCTGATGA CCGTCGCCGG GCCGAAGGCG CGGATCGTGC TGCTGGGCGT CGCGCTGCTG
CCGTTCTGGA TCAGCGCGCT CGTGCGCACG TTCGCGTGGC TGGTGCTGCT GCAGCCCGGC
GGCGTCGTCG CGACGATCGT GCCGTTCGGC CTCGGCGACG ACCTGCTCGG CAGCTGGTGG
GCGGTCGAGA TCGGGATCGC GCAGGTGCTG CTCCCGTTCA TGGTGCTGCC GCTGTACGCG
ACGATGCGCG GCATCGACCG CGGGCTGCTG CGCGCGGCCG AGAGCCTCGG GGCGCGGCCG
AGCGTCGCGT TCCTGCGGGT CTTCGTGCCG CTCTCGCTGC CGGGTGTGTT CGCGGGCTGC
CTGTTCGTGT TCATCCTCAC GCTCGGCTTC TACGTCGTGC CGGCCCTGCT CGGCTCGCCG
AGCCAGGCGC TGATCGGCCA GACGATCTAC ACGCAGGTCA ACGAGCTGCT GGCCTGGGGC
CGCGGCGGCG CGCTCGCCGT CGTGCTGCTG GTCGCGACCT TCCTCGTGCT CGGCCTCGTC
GCGGCCGCGC GCCGCTTCCT GCCGGGGGCG GTGGTGCGCC GTGGCTAG
|
|---|
| Protein sequence | MASSGRRIPW LVLPALALLA LGVVYPVGIS VWRSFAEQDG GQSGYAWMLG NDVYVTILLR
TFATALLTTL VCLLVAYPYA YLMTVAGPKA RIVLLGVALL PFWISALVRT FAWLVLLQPG
GVVATIVPFG LGDDLLGSWW AVEIGIAQVL LPFMVLPLYA TMRGIDRGLL RAAESLGARP
SVAFLRVFVP LSLPGVFAGC LFVFILTLGF YVVPALLGSP SQALIGQTIY TQVNELLAWG
RGGALAVVLL VATFLVLGLV AAARRFLPGA VVRRG
|
|---|
| |