Gene Cwoe_0542 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_0542 
Symbol 
ID8730970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp568404 
End bp569165 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content66% 
IMG OID646501155 
ProductABC-2 type transporter 
Protein accessionYP_003392352 
Protein GI284042012 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1682] ABC-type polysaccharide/polyol phosphate export systems, permease component 
TIGRFAM ID[TIGR00025] ABC transporter efflux protein, DrrB family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAGC ACTTCGTCGG CGACAGCGCC GCCCTGCTGG GCCGGTCCCT GCGCCACATC 
CTGCGCAGTC CCGACACGAT CATCACGACC GCGGTCATGC CGATCGCGTT CATGCTGATG
TTCGTGTACG TCTTCGGCGG CGCGATCGAG ACCGGCACGG ACTCGTACAT CGACTACATG
CTGCCCGGCA TCCTGCTGAT CACCATCGCC TCGGGGATCT CGTACACCGC ATATCGCTTG
TTCCTGGACA TGCAGAGCGG GATCTTCGAG CGCTTCCAGT CGATGCCGAT CGCCCGCTCG
AGCGTGCCGT GGGCGCACGT GCTGACCTCG CTCGTCGCCA ATCTGGTCTC ACTCGTGATC
GTCGTCGCCG CCGCGTTCGT GATGGGGTTT CGCACGGGGG CTGGACCGCT GGCGTGGATC
GCGATCGCCA GCATCCTGAT CCTGTTCACC GTGGCGCTGA CGTGGCTCGC CGTGATCGCC
GGTCTCACCG CGAAGACCGT GGACGGTGCG AGCGCGTTCT CCTACCCGCT GATCTTCCTG
CCGTTCGTCA GCTCGGCGTT CGTGCCGACC GACAGCATGC CCGCCGCGGT CGCGTGGTTC
GCCGAGAACC AGCCGGTGAC GTCGATCGTC AACGTCATCC GCGACCTGTT CCTGGAGCAG
CCGGTCGGCG ACGACATCTG GATCGCCCTC GCCTGGTGCG TCGGCATCCT GGCCGTGGCG
TACACCTTCG CGATGGCCGC CTACCGCCGG AAGATCACCT AG
 
Protein sequence
MTKHFVGDSA ALLGRSLRHI LRSPDTIITT AVMPIAFMLM FVYVFGGAIE TGTDSYIDYM 
LPGILLITIA SGISYTAYRL FLDMQSGIFE RFQSMPIARS SVPWAHVLTS LVANLVSLVI
VVAAAFVMGF RTGAGPLAWI AIASILILFT VALTWLAVIA GLTAKTVDGA SAFSYPLIFL
PFVSSAFVPT DSMPAAVAWF AENQPVTSIV NVIRDLFLEQ PVGDDIWIAL AWCVGILAVA
YTFAMAAYRR KIT