| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_0409 |
|---|
| Symbol | |
|---|
| ID | 8730837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 418456 |
|---|
| End bp | 419226 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 646501023 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003392220 |
|---|
| Protein GI | 284041880 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.401314 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCAGTCA CATGCCGGCG ATTCGCCGAG CACGTCGCCG TCGTCACCGG AGCGGCCGGC
GGCATCGGCG CCGCGACCGC GCAGCGGCTG GCGGGAGAGC GTGCGACCGT CGTGCTCGTC
GACCGCGACG AGGCTGCGGT CGACGCGCTC GCGCGGGCGC TGCGGGACGC CGGTCACCGC
GCCGACGCGG TCGCCGCCGA CGTGACCGAC GCGGCGGCGG TCGACGCGCT CGTCGCCAGC
GCGGCCGAGC GGCACGGCCG TCTCGACGTG CTCGTCAACA ACGCCGGGAT CACGCGCGAC
AACCTCCTCT TCAGAATGAC CGACGCCGAC TGGGAGACCG TCGTCGACGT CAACCTCAAG
AGCGTCTTCC TCTGCTCGCG GGCGGCGCAG CGGGTGATGG TCGAGGCGAG ACGCGGCGCG
ATCGTCTCGC TCTCCAGCCG CTCGGCGCGC GGCAACCGCG GGCAGGCGAA CTACAGCGCG
GCGAAGGCGG GGATCCGCGG CCTGACCGCG ACGATGGCGC TCGAGCTGGG GCCGTTCGGG
ATCCGCGCCA ACGCCGTCGC CCCCGGCTAC ATCGCGACCG CGATGACGGA TGCGACCGCG
CGGCGGATCG GCCTCGACCC CGAGGAGCAC CGCGCCCGCG CCGCGGCCGC GACGCCGCTG
CGGCGCGTCG GCACCCCGGA CGACGTGGCG GGCGTCGTCG CCTTCCTCGC CTCCGAGGAC
GCGGCGTACG TGAACGGCCA GACGATCGAG ATCAACGGAG GTGCGCGCTG A
|
|---|
| Protein sequence | MSVTCRRFAE HVAVVTGAAG GIGAATAQRL AGERATVVLV DRDEAAVDAL ARALRDAGHR
ADAVAADVTD AAAVDALVAS AAERHGRLDV LVNNAGITRD NLLFRMTDAD WETVVDVNLK
SVFLCSRAAQ RVMVEARRGA IVSLSSRSAR GNRGQANYSA AKAGIRGLTA TMALELGPFG
IRANAVAPGY IATAMTDATA RRIGLDPEEH RARAAAATPL RRVGTPDDVA GVVAFLASED
AAYVNGQTIE INGGAR
|
|---|
| |