Gene Cwoe_0360 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_0360 
Symbol 
ID8730788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp368165 
End bp368953 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content74% 
IMG OID646500974 
ProductRNA polymerase, sigma 28 subunit, FliA/WhiG 
Protein accessionYP_003392171 
Protein GI284041831 
COG category[K] Transcription 
COG ID[COG1191] DNA-directed RNA polymerase specialized sigma subunit 
TIGRFAM ID[TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.988138 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0985551 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGGGCT CCACCAGACG GATCGTCCTC GCGGAGCGGT GGCGACGCTA CAAGGGGACC 
GGCGAGCGGG CGGCACGCGA CGACCTCGTC CTGGCGTACT CGCCGATCGT CAAGTACGTG
GCCGGCCGCG TCGCCGCGCG GATGCCCGCC CACGTCGACG TCGCCGACCT CATCTCCGAC
GGCTTCAAGG GCCTCCTGGA CGCGGTCGAG CGCTTCGAGC CGGTCCGCGG CGTCCGCTTC
GAGGCGTACG CCGACACCCG CATCCGCGGC GCCATCTTCG ACGGGCTGCG ATCGCTCGAC
TGGGTGCCGC GCGCGGTCCG CGCGGAGGCG CGTGAGATCG AGCGCGCGAC CGCCGAGCTG
GCGATGCGCC TCCAGCGGAT GCCGACCGAC CCCGAGCTCG CCGGCGCGCT CTCGATGAGC
CGCAGGCAGC TGGCCGCGTC GCTCCAGCGC GTCTCCGACT CGCGCATCGT CGCACTCGAC
GAGCCGTGGG GCCCGGTGCT GGCCGACGGC CGTCCCGTCG CGCTGCTCGA CACGTTGCCC
GACCTCGACG CCGTCGACCC GGCCGCCGAC AGCGACGAGA CCGAGCGGAG CGAGCGGATC
GGCGCCGCGG TCCGGCAGCT GCCCGCGCGC GAGCAGGTCG TGCTCGGGCT GCGCTACCAC
CACGACCTCA CCCTCCTCCA GATCGGTGAG GTGCTCGGAA TCTCGGAGTC GCGGACCAGC
CAGCTCCACA CCAAGGCCGC GCTCCAGCTC AAGGCGGTGC TCGCCACGGA TCGGGCGCCC
GTCGCCTGA
 
Protein sequence
MTGSTRRIVL AERWRRYKGT GERAARDDLV LAYSPIVKYV AGRVAARMPA HVDVADLISD 
GFKGLLDAVE RFEPVRGVRF EAYADTRIRG AIFDGLRSLD WVPRAVRAEA REIERATAEL
AMRLQRMPTD PELAGALSMS RRQLAASLQR VSDSRIVALD EPWGPVLADG RPVALLDTLP
DLDAVDPAAD SDETERSERI GAAVRQLPAR EQVVLGLRYH HDLTLLQIGE VLGISESRTS
QLHTKAALQL KAVLATDRAP VA