| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_0196 |
|---|
| Symbol | |
|---|
| ID | 8730624 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 197356 |
|---|
| End bp | 198768 |
|---|
| Gene Length | 1413 bp |
|---|
| Protein Length | 470 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 646500810 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003392007 |
|---|
| Protein GI | 284041667 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACC GCTACACCGA CCTCATCAAC ACGCCGCTCG GCAGACTCGT CCAGAAGCAG
GTCGGGCTGC CGGCGCCGGT GCCGCTCAAG CGCTACAGCC CGGGCGATCC GGCCGTCGAC
GGCCGCGTGC TGCTGGCCGG TGCGCCCGGC GGGCGGCTCG CGAGCGCGCT CGCCGCGATC
GTCGCCGACA CCGGCGCGGA GGCCTCGACG CCGCTGCGCG AGGACCTGCG CGCGGCCGCG
GCGGAGGCCG GTCTGGACGC CGGCCCGTGG ACGCCGGCCG CCGCCGCGAC GCAGCGCTAC
GGCGCGCTCG TCTTCGACGC GACCGGGATC TCGGAGCCGG CCGAGCTGAA GGCGCTGCAC
GACTTCTTCG GCGCGACGAT CCGCCGCGTC CAGCGCTGCG GCCGCGTCGT CGTGCTCGGC
ACGACCCCGA GCGCGGCGAG CACGCCGAGC GAGGCGATCG CGCAGCGTGC GTTGGAAGGC
TTCACCCGCT CGGTCGGCAA GGAGCTGAAG GCGGGCGCGA CTGCGCAGCT CGTCTACGTC
GCGCCCGGCG CCGAGGACCA GCTCGCCTCG ACCCTGCGCT TCCTGCTGTC GCCGAAGTCG
GCCTACGTCG ACGGCCAGGT GATCCGCGTC GGCGAGGCCG GCGCGGTCCC CGCGATCGAC
TGGGAGCAGC CGCTCGCCGG CAAGGTCGCG CTCGTGACCG GCGCCTCGCG CGGCATCGGC
GCCGCGATCG CCGCGACGCT CGCGCGTGAC GGCGCGCACG TCGTCGGCCT CGACGTGCCG
GCGCTGCAGA GCGACCTCGA AGCCGTGACG AGCGCGCTCG GCGGCTCGGC GCTGACACTC
GACATCACCG CCGACGACGC GCCGAGAGCG ATCGCCGCGC ACCTCAGAAG AGAGCACGGC
GGGGTCGACG TGGTCGTCCA CAACGCGGGC ATCACGCGCG ACAAGACGCT CGCGCGGATG
GACGACGACA AGTGGAGCAG CGTCATCGCC GTCAACCTCG CCGCCGTCCA GCGGATCACC
GACGCGCTGA TCGCGGGCAG AAGCAGAGCG GTCCTGAACG ACGGCGGCCG GATCGTCTGC
GTCTCCTCGA TAGCGGGCGT CGCCGGCAAC TTCGGGCAGA CCAACTACGC GACCTCGAAG
GCGGGCGTGA TCGGCGTCGT GGAGTCCTAC GCGCCGCTGC TGGCCAAGCA GGGCGCGACG
ATCAACGCCG TCGCCCCCGG CTTCATCGAG ACGCAGATGA CGGCGAAGAT CCCGTTCGCC
ACGCGCGAGG TCGGGCGTCG CATGAACTCG CTCTCCCAAG GCGGGCTGCC GGTCGACGTC
GCCGAGGCGA TCGCCTACTT CGCCAGCCCC GCCTCGACCG GCGTCACCGG CAACGTCGTC
CGCGTCTGTG GCCAGAGCCT GCTGGGGGCC TGA
|
|---|
| Protein sequence | MSDRYTDLIN TPLGRLVQKQ VGLPAPVPLK RYSPGDPAVD GRVLLAGAPG GRLASALAAI
VADTGAEAST PLREDLRAAA AEAGLDAGPW TPAAAATQRY GALVFDATGI SEPAELKALH
DFFGATIRRV QRCGRVVVLG TTPSAASTPS EAIAQRALEG FTRSVGKELK AGATAQLVYV
APGAEDQLAS TLRFLLSPKS AYVDGQVIRV GEAGAVPAID WEQPLAGKVA LVTGASRGIG
AAIAATLARD GAHVVGLDVP ALQSDLEAVT SALGGSALTL DITADDAPRA IAAHLRREHG
GVDVVVHNAG ITRDKTLARM DDDKWSSVIA VNLAAVQRIT DALIAGRSRA VLNDGGRIVC
VSSIAGVAGN FGQTNYATSK AGVIGVVESY APLLAKQGAT INAVAPGFIE TQMTAKIPFA
TREVGRRMNS LSQGGLPVDV AEAIAYFASP ASTGVTGNVV RVCGQSLLGA
|
|---|
| |