| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_0127 |
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| Symbol | |
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| ID | 8730555 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Conexibacter woesei DSM 14684 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013739 |
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| Strand | - |
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| Start bp | 126012 |
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| End bp | 128807 |
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| Gene Length | 2796 bp |
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| Protein Length | 931 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646500741 |
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| Product | PKD domain containing protein |
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| Protein accession | YP_003391938 |
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| Protein GI | 284041598 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 2 |
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| Fosmid unclonability p-value | 0.00188311 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGTCCCTGT GGTCCACCGC GCGACGCGCG GTACCCACCG CGCTCGTCGC CGCCGCCGCT
GTCGGCGCCG TCGCGAGCGC ACCCGCCGCC GCGGCGCCGG GAGACCCGTC GGCCGACGTG
ACGGCGGCGC CGTACAACGC GGCCGGCGAC GACACGACGA ACGATCGCGC CGCGATCCAA
CAGGCGATCG ACGACATCGG CGCCAGAGGC GGCGGCGAGG TGATCGTGCC GGCCGGCAGA
ACGTTCCTGA CGGGCAGCCT GAAGCTGAGA TCCGGCGTCA CGCTGCGGCT CGACGGCACG
CTGAGACAGA GCCAGGACGT CGCCCACTAC GCGAAGGCGC CGATCCCGGG CCTCGACATG
CCGACGGACA TCCCCTGGCA TCGCGCGTAC TTCCACAACG ATCCGCTGAT CGGCGCGATA
GGCGTCCACG ACGTCGCGAT CGTCGGCAGC GGCAAGCTGC AGATGACCGT CCAGGCCGAT
CACACGAGAC GGATCGACAT CATCCCCGTC GGCTTCTTCG AGGCACAGCG CTTCACCCTC
CGCGGCATCA CGATCCGCGA GGCGCGCACG ACGATCATCA CGATGCTGCA CTCCAGCGAC
GGCCTCGTCG CGAACAACGA CGTCGCGACC TCGCCCGACC TCGGCGCCGA CGGCATCGTC
GTCAGCGGCT CGCAGCGCGT GAGAGTGCTG CACAACAGAG TCCGCACGAG CGACGACAAC
TTCGTTCTGG AGACGAAGCA CCTCGACCCG CGTGACCAGG ATTCGTGGTG GAGCTCGGCG
ACCTCGACGC CGCTGAAGGA CATCGAGCTG GCGTACAACG ACGCCGAGAA CTTCGGCGCG
CGCTACTCGA TCGCGTTCCT CCCGTGGGCG AGCACGCCGG CCGACAAGCG CGACGCCGCG
ATCTCCGACA TCTGGATCCA CGACAACAGA CTCGTGTCGA GAAACGACAC GTGGGTCTAC
TGCGACTGCG ACAACCCGTT CAACCCGGAG AGAAGACCGT TCATCCAGCC GACCCGGCGC
GGCGAGCAGG CGCCGATGAC GCGGATCGTG ATGGAGAGAA ACACCTACGA CGGCAGAATG
TGGCCGTTCT ACTCGTGGGT CCCGCCCGTC TTCACCGACT CGCGCTTCGA GATCGCGCGC
GCGAACGCAC CGGCGCTGAT GAACGGCGAC TTCGAGAGAA CCGCGGCCGT CTGGTGGAGC
CCCGAGGGCA ACGCCGGCGC GACCGACGAC CCGGCCGAGG TGCCGGAAGC GGCCGAGGCC
GCGTTCGCGA GACGCGGCGG CAGCTTCGCC GCGTACCTGG AGACGCGCCG CAATCAGAGA
GCCGCGCTCT ACCAGGGAAT CAGCCTGAAG AACGCCGCCA CGCTGCAGAT GCCGCGTCTC
GGCCTCGGCA ACAGAGCGGT CTACACGTTC GAGGCGAACG TCGTCACGAG CGGCCACGCG
TTCGCGCTCG TCGCGCGCGA CACCTGCGCG AACAGAGAGC TGGCACGACG GCTCGTCGCC
CCGCGCAGCT TCCGCCGCGA GCGGCTGCTG ATCCCGGTCG AGACGAACTG CGACCTCGTC
CGCGTCGGGA TCGAGCGGAC CGCCGCGAAC GGCGCCTGGG CGCTGCTCGA CGACGCCGAG
CTGCACATGC CGGTGATCGA CAGCGAGGAC CCGCGCTGGG TCCTGAGAGG CATGTGGATG
CGCGACTGGT CGGGCTGGGA CGTCGGCGAG ACCGACCACC ACGCCGGCGA CGACGGCGGC
TCCGCGGCGC TGACGTACAC CGGCGGGCAG GCGAAGCTGA TCTCCGCCAG AAAGCCGTGG
GGAGGAATCG TCGAGATGTC GGTCGACGGG GCGGCGAGAG GCGACGTCGA CCTCTACGGC
AGCCAGCAGA TCGGCGGGCT CGAGGTGTTC GACACGGGCA CCCTGAGCAG CGGCAGACAC
ACGCTGAGAC TCACCATCAC GGGCCGCAAG AACGCGGCGT CGGAGAACGA CTACGGCATC
TTCGACGCGA TCGTCGTGCC GGAGTGGGTC AACCCCGCCG CGCCCGCCGC GCACCTCGAG
GAGCTGCGTC CGGACCTCGG CGCGGTCGTC GTGCCGGGCA GAGCGCTCGT CGGCCACCCG
GTCTACGTGG AGGCGCCCGC GTACGCGCCG CGCGGCGGCG GCGTGACGGT CGGCTGGAGA
CTCGGCGACG GCACGACGAC GAGCGGTTCG AAGGCCAACC ACGTCTACGA CGCGCCCGGC
ACGTACACCG TGACGGTCGA GGCGAGAGAC ACGCACGGCG AGACGACGAC GGCGACGCGC
ACGATCGTCG TCAGAGCGGG CCCGTCGGGC CTCGCAGGCC TGGACGGCGC GGCCGGCGCT
GACGGAACCG ACGGGGCGCC CGGCGAGCGT GGGGCCGACG GTCCGGCAGG GCCTGCGGGC
GCGGCCGGCG CGACGGGCGC GACCGGTCCG GCCGGCGCAA CGGGCGCAGG CGGCCCGACC
GGGGCGCGCG GCGCCGCTGG GCCGAAGGGC GACGCGGGCG ATCCGGCGAA CGTGTCGGTC
AGCTGCACGC TCGTCAAGCG CCGCACGGCG GTGCGCTGCA CCGTGGCGGC GACGAGAGCG
CGGGCGCGCG GAGCGGCGCG CGTGAGCGGA ACGTTCCGCA CGGCCGGGAC GACGGCGCGC
GCCGCCGGCT CGGGCCGCGT CGCCGTCACG CTGCGTCCGG CGCAGCGGCC CACGAAGAGC
GCGCGCGTCG CGGTGCGGCT GCGCGTCGAC GGGATCGCGA AGGACCTGGT CGTGCCGCTC
GGCACGACGC GAAGCGTCGC GCTGCCGCGT AGGTAG
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| Protein sequence | MSLWSTARRA VPTALVAAAA VGAVASAPAA AAPGDPSADV TAAPYNAAGD DTTNDRAAIQ
QAIDDIGARG GGEVIVPAGR TFLTGSLKLR SGVTLRLDGT LRQSQDVAHY AKAPIPGLDM
PTDIPWHRAY FHNDPLIGAI GVHDVAIVGS GKLQMTVQAD HTRRIDIIPV GFFEAQRFTL
RGITIREART TIITMLHSSD GLVANNDVAT SPDLGADGIV VSGSQRVRVL HNRVRTSDDN
FVLETKHLDP RDQDSWWSSA TSTPLKDIEL AYNDAENFGA RYSIAFLPWA STPADKRDAA
ISDIWIHDNR LVSRNDTWVY CDCDNPFNPE RRPFIQPTRR GEQAPMTRIV MERNTYDGRM
WPFYSWVPPV FTDSRFEIAR ANAPALMNGD FERTAAVWWS PEGNAGATDD PAEVPEAAEA
AFARRGGSFA AYLETRRNQR AALYQGISLK NAATLQMPRL GLGNRAVYTF EANVVTSGHA
FALVARDTCA NRELARRLVA PRSFRRERLL IPVETNCDLV RVGIERTAAN GAWALLDDAE
LHMPVIDSED PRWVLRGMWM RDWSGWDVGE TDHHAGDDGG SAALTYTGGQ AKLISARKPW
GGIVEMSVDG AARGDVDLYG SQQIGGLEVF DTGTLSSGRH TLRLTITGRK NAASENDYGI
FDAIVVPEWV NPAAPAAHLE ELRPDLGAVV VPGRALVGHP VYVEAPAYAP RGGGVTVGWR
LGDGTTTSGS KANHVYDAPG TYTVTVEARD THGETTTATR TIVVRAGPSG LAGLDGAAGA
DGTDGAPGER GADGPAGPAG AAGATGATGP AGATGAGGPT GARGAAGPKG DAGDPANVSV
SCTLVKRRTA VRCTVAATRA RARGAARVSG TFRTAGTTAR AAGSGRVAVT LRPAQRPTKS
ARVAVRLRVD GIAKDLVVPL GTTRSVALPR R
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