Gene Cwoe_0122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_0122 
Symbol 
ID8730550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp119110 
End bp119892 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content76% 
IMG OID646500736 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_003391933 
Protein GI284041593 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.13092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0162871 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCG TCGTCGTGAC GGGAGCGGGC ACCGGCATCG GCCGCGCGAT CGCCGAGCGG 
CTCGCGGCGG ACGGCTGGGC GGTCGTCGCG CTCGAGCACG ACGCGGCACT GGCGTCGGAG
CTGGAGGGCG TCGTCGCCGC GACGGTCGTC GGCGACGCCG GTGACCGCGA CGACATCGCC
GCCGCGGTCA CCGCGGCCGA GGCGCTCGCG CCGCTGGGCG GCTGGGTCAA CAACGCCGGC
ATCACGACGC AGGGGACGCT GCACGACCCC GATCCCGAGC AGGTGCGGCG GCTGCTGTCC
GTCAACGTCG ACGGCGTCTA CTGGGGCTGC TCGGCGGCCG TGCGCTCGTT CACCGAGCGC
GGCGCGCCGG GCGCGATCGT CAACATCTCC TCGATCCACG GCCGCGCGGG CGCGGTCGCA
CACGCCGCCT ACGACACGTC GAAGGGCGCG ATCGACGCGC TCACCCGCCA CGTCGCCTCC
GCCTACGGCC CGTACGGGAT CCGCGCCAAC GCGATCGCCC CCGGGGCGGT CATGACGCAG
GCGCTGGAAC GGAGCTTCGA GGAGGCCGAC GACGGCGCCG CGCGCCGCGC CGGGCTGGAG
CGTCAGGCGC CGCTGCGCCG GATCGGCGAG CCGGCCGAGA TCGCCGCCGT CGCCGCGTTC
CTGCTGTCCG AGCAGGCGTC GTTCCTGACC GGCCAGTCGA TCGCGGTCGA CGGCGGCTGG
ACGACCGCGC TCGTGCCGCC CCCGCTCGAC CCGGAGCTGG CGGAGCGGTA CGGGCTGAGA
TGA
 
Protein sequence
MSSVVVTGAG TGIGRAIAER LAADGWAVVA LEHDAALASE LEGVVAATVV GDAGDRDDIA 
AAVTAAEALA PLGGWVNNAG ITTQGTLHDP DPEQVRRLLS VNVDGVYWGC SAAVRSFTER
GAPGAIVNIS SIHGRAGAVA HAAYDTSKGA IDALTRHVAS AYGPYGIRAN AIAPGAVMTQ
ALERSFEEAD DGAARRAGLE RQAPLRRIGE PAEIAAVAAF LLSEQASFLT GQSIAVDGGW
TTALVPPPLD PELAERYGLR