Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_7060 |
Symbol | |
ID | 8716335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013737 |
Strand | - |
Start bp | 5297 |
End bp | 6370 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003391802 |
Protein GI | 284006002 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0238448 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATGACTA AGATAGGTGG GGGGAGTGCC GGTAGTTGTG GGGGACTCGT CCAGTATTTG GAAAAGGAAC AGGCGGGGTT ATGGTTTAAC CAGAATCGGG AGCAGTTAGC GGGCCATGAG GTTGTGGCCG AGATCGACCC CAACAAACGC AATTTAGGCC GGGAGGATGC TAAGTACTAT CAGGTGATTT TAGCCCCTTC ACAGGCTGAA TTAGCCCATA TCAGTAGTGA CTCGCAGAAG TTACAGGCAT TTACAAGGGC CGCAATGGAA GAGTACGCCC AAAATTTTGG AAAGGGGATA GAAAGCAAAG ACTTAGTATG GTTTGCCAAG ATCGAGCACA GCCGCAGTTT CGACCACACC GACCGCGCGG TCCAATTAGG GGAGCAGCAG AAGGGCGTAA CCAAGACCGG CGATCAAACC CACATTCATG TGATCGTCAG CCGAACGGAG AATCTACGGG CGTATGCAGA AGGGAAGAAA AACGGGCTTC ATGAGCGCAA GAACCCGTAT CATCTTAGCC CCCTGACCAA CCACAAGGCC ACCACGAGAG GCGTTGTACT AGGCGGTTTT GGGCGCAATA GCTTTAGTCA GCGTGCCGAG CAGACCTTTG ACCAGGCGTT TACCTACGAG CGCTCGTTAA CCGAATCCTT CCGGTTTTTG CACTGCATGA AGTACGGTGA TGAACAGGCC AAAGGGGAGA TGCAACGACA GGCCGCAGAA CAGGCGGCAG CGGCCGACCG CCAAAAACGC GCTCAGAGCC ACGAACAGAG TCAACGGCTA GAAATGTACC AGCAACCCGG CAAAACGCCC CAAAACGAGT TTACCGACGA TTTGCGGGCC AGTCTAAGTA AAGCTTATCA GCAAAAGGAT GTAAACGATT TAGGCGCAGC ACTGGCCAGC GCACAGGCCG AGCGAGAACG GCAGCGAGTA GCACAGGAGC AAAAGGCAGA AGAAGCCCGT AAACAGGCCC TAGAAGCCAC CAAACTAGCC GAGCAACAGA AGTTAGCCCA GCAACAGAAA ATCGAACAGA AACCCGAAAA TAGCCCCCGA ATCAGCCGGG GGTTAGGCTT ATGA
|
Protein sequence | MMTKIGGGSA GSCGGLVQYL EKEQAGLWFN QNREQLAGHE VVAEIDPNKR NLGREDAKYY QVILAPSQAE LAHISSDSQK LQAFTRAAME EYAQNFGKGI ESKDLVWFAK IEHSRSFDHT DRAVQLGEQQ KGVTKTGDQT HIHVIVSRTE NLRAYAEGKK NGLHERKNPY HLSPLTNHKA TTRGVVLGGF GRNSFSQRAE QTFDQAFTYE RSLTESFRFL HCMKYGDEQA KGEMQRQAAE QAAAADRQKR AQSHEQSQRL EMYQQPGKTP QNEFTDDLRA SLSKAYQQKD VNDLGAALAS AQAERERQRV AQEQKAEEAR KQALEATKLA EQQKLAQQQK IEQKPENSPR ISRGLGL
|
| |