Gene Slin_7060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_7060 
Symbol 
ID8716335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013737 
Strand
Start bp5297 
End bp6370 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391802 
Protein GI284006002 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0238448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACTA AGATAGGTGG GGGGAGTGCC GGTAGTTGTG GGGGACTCGT CCAGTATTTG 
GAAAAGGAAC AGGCGGGGTT ATGGTTTAAC CAGAATCGGG AGCAGTTAGC GGGCCATGAG
GTTGTGGCCG AGATCGACCC CAACAAACGC AATTTAGGCC GGGAGGATGC TAAGTACTAT
CAGGTGATTT TAGCCCCTTC ACAGGCTGAA TTAGCCCATA TCAGTAGTGA CTCGCAGAAG
TTACAGGCAT TTACAAGGGC CGCAATGGAA GAGTACGCCC AAAATTTTGG AAAGGGGATA
GAAAGCAAAG ACTTAGTATG GTTTGCCAAG ATCGAGCACA GCCGCAGTTT CGACCACACC
GACCGCGCGG TCCAATTAGG GGAGCAGCAG AAGGGCGTAA CCAAGACCGG CGATCAAACC
CACATTCATG TGATCGTCAG CCGAACGGAG AATCTACGGG CGTATGCAGA AGGGAAGAAA
AACGGGCTTC ATGAGCGCAA GAACCCGTAT CATCTTAGCC CCCTGACCAA CCACAAGGCC
ACCACGAGAG GCGTTGTACT AGGCGGTTTT GGGCGCAATA GCTTTAGTCA GCGTGCCGAG
CAGACCTTTG ACCAGGCGTT TACCTACGAG CGCTCGTTAA CCGAATCCTT CCGGTTTTTG
CACTGCATGA AGTACGGTGA TGAACAGGCC AAAGGGGAGA TGCAACGACA GGCCGCAGAA
CAGGCGGCAG CGGCCGACCG CCAAAAACGC GCTCAGAGCC ACGAACAGAG TCAACGGCTA
GAAATGTACC AGCAACCCGG CAAAACGCCC CAAAACGAGT TTACCGACGA TTTGCGGGCC
AGTCTAAGTA AAGCTTATCA GCAAAAGGAT GTAAACGATT TAGGCGCAGC ACTGGCCAGC
GCACAGGCCG AGCGAGAACG GCAGCGAGTA GCACAGGAGC AAAAGGCAGA AGAAGCCCGT
AAACAGGCCC TAGAAGCCAC CAAACTAGCC GAGCAACAGA AGTTAGCCCA GCAACAGAAA
ATCGAACAGA AACCCGAAAA TAGCCCCCGA ATCAGCCGGG GGTTAGGCTT ATGA
 
Protein sequence
MMTKIGGGSA GSCGGLVQYL EKEQAGLWFN QNREQLAGHE VVAEIDPNKR NLGREDAKYY 
QVILAPSQAE LAHISSDSQK LQAFTRAAME EYAQNFGKGI ESKDLVWFAK IEHSRSFDHT
DRAVQLGEQQ KGVTKTGDQT HIHVIVSRTE NLRAYAEGKK NGLHERKNPY HLSPLTNHKA
TTRGVVLGGF GRNSFSQRAE QTFDQAFTYE RSLTESFRFL HCMKYGDEQA KGEMQRQAAE
QAAAADRQKR AQSHEQSQRL EMYQQPGKTP QNEFTDDLRA SLSKAYQQKD VNDLGAALAS
AQAERERQRV AQEQKAEEAR KQALEATKLA EQQKLAQQQK IEQKPENSPR ISRGLGL