Gene Slin_7048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_7048 
Symbol 
ID8716321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013736 
Strand- 
Start bp4589 
End bp5350 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391790 
Protein GI284005975 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones137 
Plasmid unclonability p-value0.858659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCAG AACAAAATAG CCTGCTGAAA AACTACCCCT TGCCCGAACG AGGAGCTTAT 
CTGGGGGCGC TTGCAACGAT GGCTTTAGCG GATGGCAATG TTTCCGCTCA GGAATTAGAA 
TTTCTAAATC TGGTAAGTCA GGCGGCTGAA CTACCCCCCA ATATGCAGCA GGAGGTCCGC 
CAGATCGCCA ATGATCCCTC TCAGGTGAGC ATGCAGAAAT GTCTCGATGT GCTCAAGGGA 
AGTCAACTCC GCTTTTCGTT CATCACCGAT GTGATTAGTT TGGCGAAGGC TGATGGCCAA 
TACACAGCTC AGGAACAGCA ACGAATGGAG GAAATGGCTG CCTATTTACA GGTTAGTCAG 
GAACAGTTCA GCATTCTTAA CCAGTTCGTC AATAAAGCGG GAGAGGCCCG GCAGCAGGGA 
GAGGACCCTA CTTCCCCCGC ATTTTTGACC AACAGTGGCT TTGGTAATGC ATTTAGGAAT 
GTTAATATAT CCCCCCAGAT GGTCCAGGGC GTGCTGGGCG TTGTAGCCCC ACTGGTGCTT 
GGAAAAATGC TGGGCAGCGG CCATAAACGG GGCCAACAAA AGGGATTAGG CGGCCTGTTG 
GGCGGGTTAG CGGGAGGAAC TGTAAGCCAG GGAGGTGGTG GCTTAGGCTC ATTCATCGCT 
ATGCTGGCTG GTGTAAGTGG CCGACGAAAA CACGGTGGCC TGAGTTCAGG AGGATTGGGG 
GGATTACTCA AAAATATTAT CGGAGGCAGT CGATTCCGCT AA
 
Protein sequence
MEPEQNSLLK NYPLPERGAY LGALATMALA DGNVSAQELE FLNLVSQAAE LPPNMQQEVR 
QIANDPSQVS MQKCLDVLKG SQLRFSFITD VISLAKADGQ YTAQEQQRME EMAAYLQVSQ 
EQFSILNQFV NKAGEARQQG EDPTSPAFLT NSGFGNAFRN VNISPQMVQG VLGVVAPLVL 
GKMLGSGHKR GQQKGLGGLL GGLAGGTVSQ GGGGLGSFIA MLAGVSGRRK HGGLSSGGLG 
GLLKNIIGGS RFR