Gene Slin_7043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_7043 
Symbol 
ID8716316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013736 
Strand
Start bp1128 
End bp2207 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391785 
Protein GI284005970 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones137 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGACTA AAATAGGGGC AGGCGGTGCA GGCAGTTCCG GGGGACTGGT GGAATACTTA 
GAGAAAGAAA ACAAGCTCAA GCCGGAACAG CAAGCTGAGT TATGGTTTAG CCAGCAGCGG
GAGCAGTTGG CTGGCCAGGA GGTAGTGGCC CAGATTGACC ACAACAAGCG CAATTTAGGC
CGGGAGGATG CCAAGTACTA TCAGGTGATC TTAGCCCCTT CACAGGCTGA ATTAGCCCAT
ATTGGCTCGG ATTCTCAAAA GTTACAGGCC TTCACCCGAG CCGCGATGGA GCAGTACGCG
GCCAATTTTG GAAAGGGAAT AGAAAGCAAA GATTTAGTGT GGTTTGCCAA GATCGAACAC
AGCCGCCACT TCGACCACAC CGACCGAGCC GTGCAACTGG GCGAGCAGCC GAAGGGCGTA
GCCAAGACCG GCGACCAGAC CCATATTCAT GTGATTGTGA GCCGAACGGA GAATCTGCGC
GAGTATGCAG CAGGGAAAAA AAACGAGCTG CATGAGCGCA AGAACCCCTA CCACCTGAGT
CCAATGACTA ACCACAAAGC CACTACGAAA GGGGTGGTGG TGGGTGGTTT TGAGCGTAAC
AGCTTCAGCC AGCGCACCGA GCAGACCTTT GACCAGGCGT TCAACTACGA GCGTTCGTTA
ACCGAATCAT TCCGGTTTTT GCACTGCATG AAGTACGGCG ACGAGCCGGC CAAAGAGGAG
ATGCAGCGGC AAGCCGCAGA GCAGACCCTA AAACGCGCTC AGAGCCACGA ACCCGGTCAA
CGGATAGGAA TGGCCGAGCA ACCCGGCCAA ACGCTGGAAA ACGAGTTTAC CGACGATTTG
CGGGCTGTCC TGAGTAAAGC CTACCAGCAG AAGGACGTAA ACGATTTAGC CGCAGCACTG
GCCACCGCGC AGGCCGAACG AGAGCGGCAG CGAGTCGCTG AGGAGCAGAA GGCCGAGGAA
GCCCGTAAAG TGGCCTTAGA AGAAACCAAA TTAGCCGAGC AGGAAAAGAT CGACCGGCAA
CTGAAAATCG AACAGGAACT CCAAAACGCC CCTAAAATCA GTCGGGGCTT AAGCCGATGA
 
Protein sequence
MMTKIGAGGA GSSGGLVEYL EKENKLKPEQ QAELWFSQQR EQLAGQEVVA QIDHNKRNLG 
REDAKYYQVI LAPSQAELAH IGSDSQKLQA FTRAAMEQYA ANFGKGIESK DLVWFAKIEH
SRHFDHTDRA VQLGEQPKGV AKTGDQTHIH VIVSRTENLR EYAAGKKNEL HERKNPYHLS
PMTNHKATTK GVVVGGFERN SFSQRTEQTF DQAFNYERSL TESFRFLHCM KYGDEPAKEE
MQRQAAEQTL KRAQSHEPGQ RIGMAEQPGQ TLENEFTDDL RAVLSKAYQQ KDVNDLAAAL
ATAQAERERQ RVAEEQKAEE ARKVALEETK LAEQEKIDRQ LKIEQELQNA PKISRGLSR