| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_7035 |
|---|
| Symbol | |
|---|
| ID | 8716307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013735 |
|---|
| Strand | - |
|---|
| Start bp | 2957 |
|---|
| End bp | 3910 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | |
|---|
| Product | initiator RepB protein |
|---|
| Protein accession | YP_003391777 |
|---|
| Protein GI | 284005961 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 40 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTACAGA TTGATACGTT TAAACAGACT AATGCTATCA CTGGGGCTCG ATATGACTAT
ACTACAACAG AAAAGCGCTT GGTATATCTG TCTCTCATTG AGGTTATGAA AACTGTCCAA
GATGGCATTA CAGATGACTT CTTCAATAGA GATCTTGATC TATTTATCAT GGAAGACCAA
ATGAAGAAGT CAGATCCTAA TGACAATCGC TTTCGGGACT ATCGTAAGGC AGTTGTTAGC
CTACGCAAAA AGGACTTCTC AATCGATGAA ACAGATGGAA GTTGGACAGA AACTGGTTTC
GTAACGAGAG GAAAATACAA GAAGAACAAG GGACTGGAAG TAAGCATTTC TAGAGACGTT
TTGCCCTATC TCTACGAGCT TACAAAGAGA TTTACAGTAC TGGACGCTAC TGTCGTCATG
ACTCTAGCGA GTAAGTTTTC TCAACGGTTT TATGAGTGGT GCTGTCAGTG GCGATCCGTT
GGGAAATTTG AGTTTACACC GGATAATCTT CGGGATGTAC TCTGTATTAA GCTTCTCACA
GCTCAGTTGA AACGAGATGT TGTTGAGGTA GCTCAGGCTG AGTTGATGAA AATGTATGAA
GACGGCATAA GTGATATCTA TTTCACTTAT AGCGAAGAAA GAGGAGGACG TGGACGCGGA
GGTTCTGTTA AACGATGGAC CTTTCAAATT CACACTAAAA AGAAGCAAGT GGCTCAGGAA
AGGGCCAAGA ATGAGGATGT CGTCTTCGTC ATGCGCTTTT TAGGGCAAAT CTTTGGGAAA
GACTCGCCAC TACTAGATCA GGCCTTAGAA GCCCTTAAAA CGCACGAAAA CGTCAAGCTA
TTCGCGGATC GGGCGGATGA GCTGCAAACG TCGGGCAAAC TTGATCGAAC CAAAAATAAG
CCTGGCTATA TTCGTTCAAT CCTTCAGAAA GAATTTGGTC TCGATAAGAA GTAA
|
|---|
| Protein sequence | MVQIDTFKQT NAITGARYDY TTTEKRLVYL SLIEVMKTVQ DGITDDFFNR DLDLFIMEDQ
MKKSDPNDNR FRDYRKAVVS LRKKDFSIDE TDGSWTETGF VTRGKYKKNK GLEVSISRDV
LPYLYELTKR FTVLDATVVM TLASKFSQRF YEWCCQWRSV GKFEFTPDNL RDVLCIKLLT
AQLKRDVVEV AQAELMKMYE DGISDIYFTY SEERGGRGRG GSVKRWTFQI HTKKKQVAQE
RAKNEDVVFV MRFLGQIFGK DSPLLDQALE ALKTHENVKL FADRADELQT SGKLDRTKNK
PGYIRSILQK EFGLDKK
|
|---|
| |