Gene Slin_6996 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6996 
Symbol 
ID8716264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013733 
Strand
Start bp21743 
End bp22285 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content49% 
IMG OID 
ProductATPase-like protein involved in chromosome partitioning 
Protein accessionYP_003391738 
Protein GI284005920 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value0.185924 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTTTT CCGCAGAAAT ACCCAAGGAT GCGAAAGTGG CTATTGTCGA CACGGACCTG 
CAAGGCTCCA TTACAGACCT CGGCGAATAC CTGACCGGTA TTGATATTGT TCCGATCGAG
GAACTGCTTA ACAACAACCT GGCCAGTTAC GATCTGATTA TCGTCGATAC ACCTCCTTAT
CTGTCCAATA AGCTAAGTGA GTTGTTTGCC ATATCAGATT ATGTGCTTGT ACCCACGAAA
GCGGGTATTC TGGACGCCAT GGCCATCCGG GCAACGATCG CCCTGCTGCG GCAAAGTATG
GAGCTAAAAC CAGCCCTTAA AGCAGGTATC GTGCTTAACA TGGTCCTCTC CCGAACCAGT
TTAAACGATG AGGTAAAAGA AATACTTGTT GACTATGGGA TACCACTGCA CGAGGCTGCC
ATCAGCCAGC GAGTTAGCTA CACCCGGTCA CCAATGACCA ATGGGGTATT TGGCAGTGAT
GACGGCCGGG CCAAAGAGGA GGTCATCAGC CTAGCCACTG AAATACTGAA TCAGTTGACC
TGA
 
Protein sequence
MYFSAEIPKD AKVAIVDTDL QGSITDLGEY LTGIDIVPIE ELLNNNLASY DLIIVDTPPY 
LSNKLSELFA ISDYVLVPTK AGILDAMAIR ATIALLRQSM ELKPALKAGI VLNMVLSRTS
LNDEVKEILV DYGIPLHEAA ISQRVSYTRS PMTNGVFGSD DGRAKEEVIS LATEILNQLT