Gene Slin_6990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6990 
Symbol 
ID8716258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013733 
Strand
Start bp17022 
End bp18305 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content37% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391732 
Protein GI284005914 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCAAA TTCAGAAAAT AATTCAGGAA GTAGTGTTAG AGAAGTTCAC CGTCGACTTC 
ATCATGTCTA CTTTCATAGA TAAAGAGTTG AAGAATCGGG GAATAATACT TGACGACAAA
CAATTCAAAC TTTTACAGTC AGAGATTAAG ATCACTGAGG TAGAATCTGT CGATTACATA
CAAGAATCTA TATGTGATAT TCTGCAAAAA GTTGGCATTG AGTATAATGT CGCTAGAGAG
TTAGATGATT ATATGGATAC GATTGATGGA AACGTTCTAA CTTCATTTGC TGAGGATTTA
TTCACGAAGG CTATAAAGAT TAGTTTTGAA AAAACTTTGG AAAAAACTTT AGAATTAGCT
GTCAATAATT TAACACACAA AATTGAACCT ATTTTAGAAA TTCAGAGTAA AGAAAGGGAA
AGATTTGGTA ATGGCCTTGT GCTGATATGG GGTGATGCCC TTAAAAAACT TGACTTCTTT
ATTACAACGG TAACAGAAGT ATGTAGAAGA TATCATTCCG AACATGGTGA TTTAAGCCAG
AGAGAAGATG GAATCACCTT CAATGCTTTA GGTCGTTTGC TAGCACGAGC ATGTCAAATA
TCTTTTGAAA TTCTTACTCT GTTGCGAGCT GGATTTGCTG ATGGTGCTTA TGCAAGATGG
CGAACATTAC ATGAAGTAAC TGCCATTGCA TTGTTTATTA GTAAGCACGG AGAAGAAACT
GCTAAACGAT ATCTTCATCA TTATGTAGTT GACTCATACG AAGCTGCTTT AGCTCACCAA
GAATACTATC AGCGGTTGGG CTATGAGCCA ATTCCTGTTG ATGAGTTCAA AGATATTAAA
GATGATTATG ATCAAACAAT TTCAGAATAT GGCGATAGTT TTAAAGGTCA GTACGGCTGG
GCTGCTAATG CACTTGGTTT AAAAAAGCCA ACTTACAAGG ATGTAGAAAC AAGTGTCAAA
CTGGATCATT TGAAGCCTTA CTACAAGTAT GCAACTAGCA ATGTTCACGC AACTCCAACA
GGTATTTATG CTAAACTTAG TTTACCAGAG AGCGGATTCA GAAGTGGACT TTTAACAGGA
TACAGTATGT TAGGTCTAGA TATCCCTGGT CGGTCAACTG CTATGTCACT TTATCAGATC
GCGGTCGCTT ATTTTACGTT GGAAGCAGAC GCTGATAATA TTCATACATG TAATCTAGTA
GAACATTTTA AGCTAGAAGT GATGAAAGCG TTTGCAGAAG CCGCAGATAA AATTCAAGTA
GCGGATTCAA AAGATGGAGA ATGA
 
Protein sequence
MSQIQKIIQE VVLEKFTVDF IMSTFIDKEL KNRGIILDDK QFKLLQSEIK ITEVESVDYI 
QESICDILQK VGIEYNVARE LDDYMDTIDG NVLTSFAEDL FTKAIKISFE KTLEKTLELA
VNNLTHKIEP ILEIQSKERE RFGNGLVLIW GDALKKLDFF ITTVTEVCRR YHSEHGDLSQ
REDGITFNAL GRLLARACQI SFEILTLLRA GFADGAYARW RTLHEVTAIA LFISKHGEET
AKRYLHHYVV DSYEAALAHQ EYYQRLGYEP IPVDEFKDIK DDYDQTISEY GDSFKGQYGW
AANALGLKKP TYKDVETSVK LDHLKPYYKY ATSNVHATPT GIYAKLSLPE SGFRSGLLTG
YSMLGLDIPG RSTAMSLYQI AVAYFTLEAD ADNIHTCNLV EHFKLEVMKA FAEAADKIQV
ADSKDGE