Gene Slin_6988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6988 
Symbol 
ID8716256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013733 
Strand
Start bp13015 
End bp13545 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content47% 
IMG OID 
ProductIntegrase catalytic region 
Protein accessionYP_003391730 
Protein GI284005912 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones51 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.870361 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAACG AAAGGTGCAC GTCCGGTTCG GGGAGAGGGC AAGCGAAACC GGTAGTTGTG 
AAACTACACA GGCGCGCTTG CCCTACTCTA CCGTACATTC CAATGGCAAC CGGATTTCTG
TATTTATGTG CAGTTATTGA CTGGCACAGC CGGTTTGTAT TAAGTTGGCG GCTATCAAAC
ACCTTACTAG TCGATTTTTG TCTTGATGCC TTACAGGAAG CCCTTGATCG GTGGGGAAAA
CCAAGAGTTT TTAATACTGA CCAAGGGAGC CAGTTTACCA GTCCACGGTT TTTGGCTCCT
TTAAAAGCCG CTGAAATACA GATTAGTATG GATTCCAAAG GCCGCGCTCT GGATAATATT
TTCGTGGAGC GGTTGTGGCG AACGGTCAAA TATGAACACG TATATTTACA TGCCTACTCC
GACGGGTTGA CACTGCATCG AGGCCTGTCC AAGTACTTTC AGTTGTATAA CTATCAACGC
AAGCACCAGT CACTGGATTA CCAAACACCA GCGCAATGGT ATATCGAGTA G
 
Protein sequence
MHNERCTSGS GRGQAKPVVV KLHRRACPTL PYIPMATGFL YLCAVIDWHS RFVLSWRLSN 
TLLVDFCLDA LQEALDRWGK PRVFNTDQGS QFTSPRFLAP LKAAEIQISM DSKGRALDNI
FVERLWRTVK YEHVYLHAYS DGLTLHRGLS KYFQLYNYQR KHQSLDYQTP AQWYIE