Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6988 |
Symbol | |
ID | 8716256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013733 |
Strand | + |
Start bp | 13015 |
End bp | 13545 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | |
Product | Integrase catalytic region |
Protein accession | YP_003391730 |
Protein GI | 284005912 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.870361 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATAACG AAAGGTGCAC GTCCGGTTCG GGGAGAGGGC AAGCGAAACC GGTAGTTGTG AAACTACACA GGCGCGCTTG CCCTACTCTA CCGTACATTC CAATGGCAAC CGGATTTCTG TATTTATGTG CAGTTATTGA CTGGCACAGC CGGTTTGTAT TAAGTTGGCG GCTATCAAAC ACCTTACTAG TCGATTTTTG TCTTGATGCC TTACAGGAAG CCCTTGATCG GTGGGGAAAA CCAAGAGTTT TTAATACTGA CCAAGGGAGC CAGTTTACCA GTCCACGGTT TTTGGCTCCT TTAAAAGCCG CTGAAATACA GATTAGTATG GATTCCAAAG GCCGCGCTCT GGATAATATT TTCGTGGAGC GGTTGTGGCG AACGGTCAAA TATGAACACG TATATTTACA TGCCTACTCC GACGGGTTGA CACTGCATCG AGGCCTGTCC AAGTACTTTC AGTTGTATAA CTATCAACGC AAGCACCAGT CACTGGATTA CCAAACACCA GCGCAATGGT ATATCGAGTA G
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Protein sequence | MHNERCTSGS GRGQAKPVVV KLHRRACPTL PYIPMATGFL YLCAVIDWHS RFVLSWRLSN TLLVDFCLDA LQEALDRWGK PRVFNTDQGS QFTSPRFLAP LKAAEIQISM DSKGRALDNI FVERLWRTVK YEHVYLHAYS DGLTLHRGLS KYFQLYNYQR KHQSLDYQTP AQWYIE
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