Gene Slin_6978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6978 
Symbol 
ID8716247 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013733 
Strand
Start bp2759 
End bp3088 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content53% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391721 
Protein GI284005903 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones54 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.802196 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCTACA ACTTTGATAA ACTAACCACC GACGTACGGG CCGCTATGAA AGCCGGACGT 
GAGTTTGCCG CCGAGGTTGA CGATGGTGGT ACCTATAATG TGGATGGCGT TCTCCTGAAA
ATTCCACGCA TCCGGGAAGC AAAAGTCGTC CAAGCTCTCG CTAAAGCGGG TGTTCGCACC
CAGAAACGCA AATGGGGCTG GCGCGGTACT GGCTACATGC TTAACCCTGG CGTTGGTCAG
GCTCACAAAA AGGAAACAGC CTGCGAAGCG ATTTTTCAGC ACTTACGCAA AGCTGGGCAC
GTTGTGTGCC GCTACCTCCA ACCAAACTAA
 
Protein sequence
MVYNFDKLTT DVRAAMKAGR EFAAEVDDGG TYNVDGVLLK IPRIREAKVV QALAKAGVRT 
QKRKWGWRGT GYMLNPGVGQ AHKKETACEA IFQHLRKAGH VVCRYLQPN