Gene Slin_6924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6924 
Symbol 
ID8716189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp97689 
End bp98903 
Gene Length1215 bp 
Protein Length404 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391669 
Protein GI284005850 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones75 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA CAATTCTTCT AACCCTACTG GCTATCCTGC TGATCGTGCC GGTGCCGGGC 
AATAGTCAGG TCGAAACCAT CGTCAATCTG GGCCTGTCGT TGCTGGGTCT AAAAGGCGGT
AAAGACCCTT ATGCCAAAGC GCGGCTAATA GAACTGAAAA AGATTCTGGA CAAGAACAAG
AAGCAACTCG GCAAACTGGC TCGAATTGAT GAAAGCAGCC AGGGAACCGA ACTCTATACA
CAGGCACAGT TGGAGATTGC CCGAAGCGTC GAAGACCTGA TGCGCTCGGT ATCGGAACTG
AAGGCAATCC GGTCGCGGGA CGGACAAATC AAATTCAACG ACTTGGTCGT CTTCAACCAA
ATTCAGCAGG AAGTAAACCA GTATCTGAGT GGTTACGTAC CTGCCCTGTT TCTGCAACAG
TTGGAAAAGC AGATTGCCGA TGGTGCGGCC CGTAATTACC CGCTGGCCAA GGACAATGGC
GGTCAGATTT ACGATATGTT CTTCGGTAAG TCGGGCCTCG ATGCCCGGCA ACCCGCCAAC
CTGACCGACC TCGGCACGGC GCGGGGTGAG GAGGCCCAGC ACCTGTTGCA ATTCCAGACG
GCCGCGCAAA AGAAGAAAAT TGTTCAATCG CTGCTATACT ACAAACTGGC CGACGAACTC
TACGCGCAAT CGGTTACGTT GAACAACGCC CTGAACGATG AGCAGAACGG CACGGCCATC
GACATCGCCC GCCGACTTCG GCAAACCGTG CTGCAACGCA TGAACGAATC CAGCATTCAG
CAATTGATCG CCGATCCACC CAACATCGGC TCCGGCTTCG ATCTGATGTC ACTCGGTGAT
CTGAGCAGTT TCCCCGCTGA AATGCAGAGT CAGCTACAGA GCATGATCGA GCAGGTGAAC
AACGATGCAC AAAGCTTTTT ATCAAATATG GATGGTGCGT TTCAGAACAC ACCGATGTTC
AACCCAAACT CCCCTGATAT GGGGTATTTC GCCGATCAGA ATGCTCCTCG CGGTCTGCGC
CTGAGTACTG GAGAACGGGC ATCGCTGCAA AAATCCGCTA TGGACATGGC CTCACAATCG
GTCGAATACA GGCAGAAGGG CGATAAACTG ATGGAAGAAG CGTTGGAGAA AACACCACTA
CAACAAGTGC TGGAGATGAA ACGGGCACGC TCGTATATGC AGGAATCGTA TCGGTACTTA
GACCTCTCGC TGTAA
 
Protein sequence
MKKTILLTLL AILLIVPVPG NSQVETIVNL GLSLLGLKGG KDPYAKARLI ELKKILDKNK 
KQLGKLARID ESSQGTELYT QAQLEIARSV EDLMRSVSEL KAIRSRDGQI KFNDLVVFNQ
IQQEVNQYLS GYVPALFLQQ LEKQIADGAA RNYPLAKDNG GQIYDMFFGK SGLDARQPAN
LTDLGTARGE EAQHLLQFQT AAQKKKIVQS LLYYKLADEL YAQSVTLNNA LNDEQNGTAI
DIARRLRQTV LQRMNESSIQ QLIADPPNIG SGFDLMSLGD LSSFPAEMQS QLQSMIEQVN
NDAQSFLSNM DGAFQNTPMF NPNSPDMGYF ADQNAPRGLR LSTGERASLQ KSAMDMASQS
VEYRQKGDKL MEEALEKTPL QQVLEMKRAR SYMQESYRYL DLSL