Gene Slin_6923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6923 
Symbol 
ID8716188 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp96355 
End bp97692 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391668 
Protein GI284005849 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAGC TGAACGCAGC CCGAAAGAAG AAACCTGAAG CCCGCTTAGA CGACGATGCC 
TTCGGACAGG CCGACACTCC GGCCGATCAG TTTGGCCATG AAGATCCTGC GGCATCGACA
GGCAATGAAC CTGCCGAAGA AATTGATGAG GTCGATGAAG AATACGACGA ATTAGACGAT
GATGATTTAG AGGAATTAGC ATCGACACAA CAGGATTCGG CATCGGGCAA AGCTGATTTA
TCGAAGCGCA AGCGGCTCGT TATCGGAGTG TTGGTAGGGC TAATAGCTGT ATTGGGCATA
GTCGGTCTGC TCTGGAAAAT GACGATCTCG ACTAATGGCT TCAAGGCTCC CGTACCTACT
GAACCTATCG ACGTGGCCGA ACGGGAAAGC AACCGTAAAA ACCAGCCCAC CGATTACGCC
GACGAAGAAC AGATGCGGAC GATGAACTAC GATGGTGTAA ACAATATCTA CGGCCTGGCT
CTCAAACAAC AGCAAGCCAA TCGGGTGCCG AAAGATTCGG TTCATCAGAA CCCATCCGTT
CAGCGTGAGC TGAACCGCTC TCAGCAGTTA GCCAAGCAGT CAGGCAATCG GCGAAACGCA
TCGGGTAGTC TTGGCACTGC GCCAAAGCGT CGCTACCAAA CGAATTCGTA TGGTTCTGAC
TATTCGGGCC GTTCATCCGC TTATGGTGAT CCGTATCATG CCAACCCCAC GCGGGAAGAC
TTGCTACTAC AGGCGGGCTT CAATACCGTA AAGGCAGAAG GAAACGGCAC TAATTCGTAT
GCCAGTCAAC AGACGTTACC ACCCCCGTCG CTGGCCACCG TTGAAGTAGA GGATAACGAG
CCGATACCAG GCGTGGTCAG TGGCGACCAA ACCATCATGA ATGGAACGCG GGTGATGTTC
CGAACGCTGG CCGATGCCAA AATCCGTGAC CGCTTCGCTC CAAAAGGTTC GATTCTGGTG
GGTTTCGCGC AGGTAGGCAG CAACCGGGCC GTGTTCAACA TCACCACGCT GCGGCTCAGT
ACGGGTGAAG CGGTACCGGT ACGTCTGCGG GCGTTGGACC CAGATATGAA CGAGGGACTT
GCCCTGCAAT CGGACAAACC GACGCGGCAG CAAGTCGATC AGGCTACCGG CAGTGCCATG
AGTCAGGCAG CCAGTCAAGC CGCCTGGTCT GCGGGCTACT CAATCAATCA GGCAACTCGT
GTGCCGGTGG CCGGCAATGC GCTGGCATCG CTTGGCGCGG GTCTGGCTTC GGCGGCAACG
ACGGGCCGAC GAAGGGAGGT GCGTCAGAAA CTGAATTTAC AGGATGGTTT TAAAGTATTC
TTTGTGCCGG TCAAATGA
 
Protein sequence
MSKLNAARKK KPEARLDDDA FGQADTPADQ FGHEDPAAST GNEPAEEIDE VDEEYDELDD 
DDLEELASTQ QDSASGKADL SKRKRLVIGV LVGLIAVLGI VGLLWKMTIS TNGFKAPVPT
EPIDVAERES NRKNQPTDYA DEEQMRTMNY DGVNNIYGLA LKQQQANRVP KDSVHQNPSV
QRELNRSQQL AKQSGNRRNA SGSLGTAPKR RYQTNSYGSD YSGRSSAYGD PYHANPTRED
LLLQAGFNTV KAEGNGTNSY ASQQTLPPPS LATVEVEDNE PIPGVVSGDQ TIMNGTRVMF
RTLADAKIRD RFAPKGSILV GFAQVGSNRA VFNITTLRLS TGEAVPVRLR ALDPDMNEGL
ALQSDKPTRQ QVDQATGSAM SQAASQAAWS AGYSINQATR VPVAGNALAS LGAGLASAAT
TGRRREVRQK LNLQDGFKVF FVPVK