Gene Slin_6920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6920 
Symbol 
ID8716185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp93512 
End bp94660 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391665 
Protein GI284005846 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones46 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones79 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAA CCTCGTTTGG CTATCTGATG GCCAACAATG GCGACCTGAT CCGTACCAAA 
GTTCTGGGGC TGGCGGCTGC GCTCATGCTC ATCAATTTCC TTTGGGCATT AGGCCGAACG
TTTCTGGTAT CGTCCGATTT GACCACCGAT TATACGCCAG TCATTCGGGC CATCATCCTG
ACTATTGTAC TAACCCTGTA CAGCGATCTT CTGTCTATTG CCACCGGCAT GATTGATTAC
GTGGCCAGCC TGTTTTCTCC CAAAGATCCA CAGGAAGTAT TGGCTTCGCT CAAGGCGATG
ACCGCCAAAG TGGACGGTGC TTTTACAACG GCTAATTCCA ACCTCTGGAA AGATTTCGAC
CTGAAGTGGG ACACCGATCA GATGAAGAAA GACATCGACA TCGTATTGGG CGTGATGAGC
AATTCGATGG AAATGGTCAT TCTGAAATTA GTGCGGTTAG TCGCTGAGGG ACTGACGCTG
CTGGTGCGGG CATTCGTGGC TAAGATGCAG GTATTGGTCG TCGTCTTTCT GGCGATCACC
GGCCCAATTG CCATTCTGAT CTCTATGATT CCCGGCTTTC AGGGGGCAAT GGCCTATTGG
TTCCGCAATC TGCTACACGC CAAATTCTGG GCGATGACCA TCGGCGTACT CGATAATATC
GTCAATTTCT ACGTGGACAA TCTCGTGGAC TCGCACATCG ACAACATGAT GAACAATGCC
ACGCTCGAAC AGCGATTCGG GGCCATCTTC AATCTGGTTG TCGTGCATTA CTGCGTCATG
GGAGCCTATT TAGCCACACC CTTTCTAACC AATACGTTTA TCGGGGGCAT CACTTCGGCG
GGTGGTCTGG CAGGCTGGGC AGCTAACAAA GGAGCCAATC TGCCGGGCGA AGCTATGCGG
ACGGGCCAGG CTATGAGCCG GAACAGTTCG AGCAGCAACC GTTCACGTTC TGGTAACTCG
ACTAATAATA CCAGTAAAGC CAGTACTGAA AAAACGGCTA AGAACACATC GCGGGCCGAA
CGGGAAGAAA GCTACGAAGC ACGTGTCGGC CGTCAGGCGG AACCGGAGCC AAGCTACAAT
GCCCCGGCCC TAAATGAAGG TCAACGGAGG GCCGATGATG ACCGCTACGA TGACTATTCT
TTTGTATAA
 
Protein sequence
MNETSFGYLM ANNGDLIRTK VLGLAAALML INFLWALGRT FLVSSDLTTD YTPVIRAIIL 
TIVLTLYSDL LSIATGMIDY VASLFSPKDP QEVLASLKAM TAKVDGAFTT ANSNLWKDFD
LKWDTDQMKK DIDIVLGVMS NSMEMVILKL VRLVAEGLTL LVRAFVAKMQ VLVVVFLAIT
GPIAILISMI PGFQGAMAYW FRNLLHAKFW AMTIGVLDNI VNFYVDNLVD SHIDNMMNNA
TLEQRFGAIF NLVVVHYCVM GAYLATPFLT NTFIGGITSA GGLAGWAANK GANLPGEAMR
TGQAMSRNSS SSNRSRSGNS TNNTSKASTE KTAKNTSRAE REESYEARVG RQAEPEPSYN
APALNEGQRR ADDDRYDDYS FV