| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6919 |
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| Symbol | |
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| ID | 8716184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013732 |
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| Strand | + |
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| Start bp | 91121 |
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| End bp | 93499 |
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| Gene Length | 2379 bp |
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| Protein Length | 792 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | Type IV secretory pathway VirB4 protein-like protein |
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| Protein accession | YP_003391664 |
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| Protein GI | 284005845 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 73 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCTGAAAG ATGGACGGGT AGCCATTGGC TATCGGTTCG AGGGTGTCGA AGCCGAAAGT
ATTACGAGCG GGGAGTACGA CGCGCTGGGA TCAGCCTTCT ACCGGGCTAC CCGGACGCTG
CCGGTTGGGA CTGTTATTCA GCGGATGGAT GCGTACTATA CCGAACGCCA CCGGATGCCG
AAGGGGGTTA GGGAGCAGAC AAACGCGCCG TTTACCCAAC AGCAACATGG GCATTTGCAG
GAGCGGTCGG TATTGCACCA TGCGGCTTAT TTGTTCATTT CGTTTGGCAA CGAGCGGCAA
CCGCGCACGA ACCCGGCCAA CACAATCTGG GCACGGCTGG GTCTGCCGAT GCTCAAAGAC
CCGTTCGAGG GCATAGACGC ATTGGTCGAG CGGGCGGAAC GGGCGGCTGA GGAGTTTACG
CAGAGTATTT CGCTGGGGCG GCTCCGCCTT ACCCGCTTAG ATAGTGAAGG ATTGGAAAAT
TTGTATTTCC AGTATTTCAA TCTGGAATTC AACCGGCAAC CAACGACGCT GAATCGTTCT
GTACAGCCTG ACGCGACCTT TGTGGGCCTG GGCGAAAAGA AGGTTAATAT TCTGACCATG
ACGGGTCAGC CTTCGGTCAT CTACAACACC CAACCAGCCC GGACGGGTGT CGATGCCCCG
TTCGTGTCGA ATCTGGCGTT GGACCTGCAA GTACCGCATT TGCTGGTGAC GAGCTTCCTG
ATCGAGGATA CCGAAAAGGT AATTGGTTCT TTGGAGTTCG AGCAGAAAAT CAACCGCAAT
CTTGATTTCC TGATGACCCA CGAGAACAAG ATCAAGATGC TCGAACTGGA GGACTACATC
GACGGGCTTC GGACGGACAA TAAAAGTCTG ATCAGCGTCA ACCTGTCACT GGTGGTCTGG
AACACCGACA ACAAACTGCG CGAAGGGTTG GTGCAACGGG GTATTGCTTC TTTCCGGGCG
ATGGGTGGGG CCGACGTATT TGTCGAGACG ATGGACACGA CGAACCTGTT CTTCGCGCTG
GCTCCGGGCA ACGGTTATCA GAATTACCGT TGGTTGCTGA TGTCGGGTGA TAACGCGGCC
TGTTACCTCA ACTGCGCGAC GAACTACCGC ACGGCCAATC AGGGCGAACT TTTGTCTGAC
CGCTATGGGA ATCCAATCTT GGTCAATCTG TTCAATACCG ATCTGAACAA TCAGAACAGC
GTTGTGGTCG GGCCAACGGG TTCGGGTAAG TCGTTTACGA TGGGCTATTT CATGCTGCAA
CGGTATGAAG CCGGGCGCAG GCAGATCATC ATCGACGTGG GCGGTACGTA CTATTCGCTG
ATGACCGCTC TTGGTGGTCG CTACTACCAA TACGATCCAC AGAACCCAAT CAAGTTCAAC
CCGTTCGGAA TTCTGGTGAA TAGTGCCGGT CAGTATGTAC CGGATGGCGA CAAGATCAAC
TTCCTCTCTA CGCTGCTGGC TATCATCTGG AAAGGCTATA AACGTCCGGT ACGTCAGGCT
GAACGGTCGG TGCTGGTTCG GTTAATTCCG ATGTACTACG AATGGTACAA CACCCAAATT
GAACAAGACC CCGGCAACCC GCCTACACCC GTACCGAGTC TGGTCGGTTT CTATGACTTT
TTGTACCAAT ACCTGAAAGA GAAGGAAGGC ACCGAAGAGT TGGTTCGCTG GCATAAGGCG
TTCGATTTTG CTGAATTCTT CACCTGTCTG GAACCGTTCG TGGTGGGCCA CTACCGCGAC
GTGCTGGATG CCGGGGAGAA TGAAGACATC AGTGGTTACC GGCTCGTCTG CTTCGATATG
GCCCGAATTA AAGACAATGA ATTGCTGAAA TCGGTGGTCA CGATGCTGAT TACCGAGCTG
TCGTTAGATG TGATTCGGCG ATATCCGAAA GATGTGAAGT ATCTCTACAT GGATGAAGCC
TGGTCGATGT TATCGGAAGG AATGGGCGAC TTCGTGGAAA TGATGTACCG CACGATTCGG
AAGAATAACG GGTCAATGTG CATCATCACG CAGGGGGTAA AAGAGATTGA GGATTCGGCG
GTCGGGCCGG TGATTATCGC CAATGCGGAT ACCAAAATTA TCCTCAACCA TCAGGACACC
AAGCAACTTG ATCGGGTATC GGCGGTGCTG GGTTTCACCA AGCACGAGTT GGATAAGATG
CGCTCGATCC GGGTGTCGAA GACCTGGCGG GAAATCTTCA TCCGACAGGG CGAATATGGC
AAGGTCTATC GACTCGAAGC GGCTCTGAAC ATTTACCCGT TGCTGACCTC GAAACCCGCC
GAACGCGAAC ATCTGCGCGA CCTTACCCAG GAATACCGGG GCAACATAGT GTACGCCGTC
AGGCAGTTCA ACGAAGACCG GGCGGCTGGC ATCATATAA
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| Protein sequence | MLKDGRVAIG YRFEGVEAES ITSGEYDALG SAFYRATRTL PVGTVIQRMD AYYTERHRMP
KGVREQTNAP FTQQQHGHLQ ERSVLHHAAY LFISFGNERQ PRTNPANTIW ARLGLPMLKD
PFEGIDALVE RAERAAEEFT QSISLGRLRL TRLDSEGLEN LYFQYFNLEF NRQPTTLNRS
VQPDATFVGL GEKKVNILTM TGQPSVIYNT QPARTGVDAP FVSNLALDLQ VPHLLVTSFL
IEDTEKVIGS LEFEQKINRN LDFLMTHENK IKMLELEDYI DGLRTDNKSL ISVNLSLVVW
NTDNKLREGL VQRGIASFRA MGGADVFVET MDTTNLFFAL APGNGYQNYR WLLMSGDNAA
CYLNCATNYR TANQGELLSD RYGNPILVNL FNTDLNNQNS VVVGPTGSGK SFTMGYFMLQ
RYEAGRRQII IDVGGTYYSL MTALGGRYYQ YDPQNPIKFN PFGILVNSAG QYVPDGDKIN
FLSTLLAIIW KGYKRPVRQA ERSVLVRLIP MYYEWYNTQI EQDPGNPPTP VPSLVGFYDF
LYQYLKEKEG TEELVRWHKA FDFAEFFTCL EPFVVGHYRD VLDAGENEDI SGYRLVCFDM
ARIKDNELLK SVVTMLITEL SLDVIRRYPK DVKYLYMDEA WSMLSEGMGD FVEMMYRTIR
KNNGSMCIIT QGVKEIEDSA VGPVIIANAD TKIILNHQDT KQLDRVSAVL GFTKHELDKM
RSIRVSKTWR EIFIRQGEYG KVYRLEAALN IYPLLTSKPA EREHLRDLTQ EYRGNIVYAV
RQFNEDRAAG II
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