Gene Slin_6908 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6908 
Symbol 
ID8716239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp86152 
End bp86772 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content50% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391653 
Protein GI284005834 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.204627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones64 
Fosmid unclonability p-value0.59164 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGATT ACCGCAGCTT ACCACGAATT GCCAACAGCG ACCTTACTGA ACTCAAAAAC 
CATCTGTTTG GCAAGCCGAA TTTTCAATCA AGCCCGGCGC AAGAATTCGG CACCCGATTT
CATGATTTAC TACTGCTCGA AACCGACGTA GTACCGACCG GCAAAGGAGC CACTGCACAA
AAGCGAATGC TCGACGTAGT TCGGGCCAAC TCTTTATTCT GTCGGTTGAT GGAGTCGGCG
CAGGTCGAAA CGGCCCAACT GTGGGATGAT GAACCGACCG GCTTACCCTG CAAAGCCCGA
ATAGATATGC GTGTACCGGA CGAACGGCTA ATCCTTGACG TAAAAACGAC CTCAGCCCGG
AGTCAGAATG AATTCGTTAG TAACTGTTAC CGATATGACT ATGACCGTCA GGCGGCTTTC
TACCTCGATG GGTGCCGACA GGCCGGGGAG TGTGCTGACC AGTTCATTAT CTTAGGTATT
CAGAAGCAGA AGCCCCATAA CCTGTACGTT GTAGAGGTTG CCGCCGACAG CATTTTTCTG
GATTATGGCC GACGTAAATA TCAACGCCTA TTACGCTCGT GGCAGGAGGT AGGTTATAAG
CCGAAGTCTT GGAATAAATA A
 
Protein sequence
MNDYRSLPRI ANSDLTELKN HLFGKPNFQS SPAQEFGTRF HDLLLLETDV VPTGKGATAQ 
KRMLDVVRAN SLFCRLMESA QVETAQLWDD EPTGLPCKAR IDMRVPDERL ILDVKTTSAR
SQNEFVSNCY RYDYDRQAAF YLDGCRQAGE CADQFIILGI QKQKPHNLYV VEVAADSIFL
DYGRRKYQRL LRSWQEVGYK PKSWNK