Gene Slin_6904 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6904 
Symbol 
ID8716170 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp81150 
End bp81863 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content50% 
IMG OID 
Productprotein of unknown function DUF305 
Protein accessionYP_003391650 
Protein GI284005831 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value0.147564 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones66 
Fosmid unclonability p-value0.887388 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA ACTTTTTATC AGCAACCAAC CTGACCGGGC TAGCCTTGGC TATGACCCTT 
ACCCTGACGG GGTGCGACAA GAACGGTAGT GAAGCCGTTG AACCCGAAAT CCTGACGGAA
GCCAGTGCGC GGACCTCATC AGATGATCCC AACGACCAGG CATTTGACCG GGAATCGGAC
CGGGTACTGG GGCAGATGAT GCGCGATATG GAAAACATGG AAATGACGGG TGACCCGGAC
ATGGACTTCG CCATGATGAT GAAGATGCAC CACCAGGGAA GCATTGATCT GGGAACCGCT
GAAAATCAGT ATGGCAAACA CGCTGAAGCG AAGAAAATGG CCGATATGGC CATTAAGGGC
GACAAGGAAA GCCAGACACG TCTGCAATCG TTTTTGAACG GACATCCCGC GCCCGAAAAG
ATAGATGCCA ACGTTTATAA GCAGTTCAAA AAGGAGATGA AAACAGCCAT GAAGCAGATG
ATTCAGGCCT ATGCAAAGGT TCCGAACACC GCCGATGTGG ACGTTGATTT TGTGCGCCGG
TTGATTGAGC ATCACAAGGG GGCTATTGCA ATGGCCACGC TTCAATTTAA GTACGGCGAT
GATAAAGCGC CGACCGATGA GGCCAGTATT ATCATTACGG AGCAGGCCAG TGCCCTCAAG
GAATTAGCTG CGTTTGCTAA TAAACATGGC ATACCGAACG CAGAACTCAA ATAA
 
Protein sequence
MKKNFLSATN LTGLALAMTL TLTGCDKNGS EAVEPEILTE ASARTSSDDP NDQAFDRESD 
RVLGQMMRDM ENMEMTGDPD MDFAMMMKMH HQGSIDLGTA ENQYGKHAEA KKMADMAIKG
DKESQTRLQS FLNGHPAPEK IDANVYKQFK KEMKTAMKQM IQAYAKVPNT ADVDVDFVRR
LIEHHKGAIA MATLQFKYGD DKAPTDEASI IITEQASALK ELAAFANKHG IPNAELK