Gene Slin_6898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6898 
Symbol 
ID8716164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp68875 
End bp70908 
Gene Length2034 bp 
Protein Length677 aa 
Translation table11 
GC content53% 
IMG OID 
Productoxidoreductase FAD/NAD(P)-binding domain protein 
Protein accessionYP_003391644 
Protein GI284005825 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGCTGC CCGCCCTATT ACTTGGAGGG ACATCGGTTA CCAACGCTCA AAGCGAGCAT 
GAACAGCATC ATCCGCAGGC CTCAGCCGCG CCGATGTCCG GTACAGAAAC GGCCATGTCG
TCCGGGACAA CAGCGACGGA TTCGGGTGGA GCCAAGGGCG TTATAGCGGG TGGTGCTAAA
GGGGGCATTA TGGCCGAAAT GGGCGAGATG ATGAAAGAGA TGGGCAAGGT TGCCCCTATG
GCACTCTATC CAACCCTGAT GCAGATGCCG GAACTGGTTC CCGAAAAACG CGATGCCATC
AGACAGGCAT CGGATGCCTG GATCAGCGAG GGGAACGCGC TGATGGCTTC GGGCCTGCGA
AAACTATCGG ATGCCGTACA ATCCAGAAAT CAGGATTTGG ACGTGAAACG GGCCGCTACC
GAAGAAATCC GGCAGGGCCA GCGGCTGCTC GAAAGCGGGT TTTCCGCGCA ACGAGCCTTA
GCCGAAAACG AAGACCCGCG CACGTTGGCC TTGCAATGGT TTAACCGTGA AATGAGGCTC
ACACCCACTG GCCAGGACGA TGAGCCACCG GGGATTGGGG ACCTATCGTG GTTTCACATC
ATTACGATGC TGACGCTAAT TATGTTTGCC ACCACGATGA TCTGGATGTA TTTTCAGAAA
ATGAAACGTG CCAATGCGCT CGTCGAAAAA CTGGGCGGAA AGTCTGACGA GACGATACCA
CCTTCGGGCG GTGCCAAGCC CGACGGTTCG ATAGCTCCTG CGCTACCATC GGGCGGTTTA
GCACCGGCAC CCAAACCCGA ACCGGTTGCT GCGATCAGCC CCGCGCCTAC GTCTCCTACG
CCCTTTGCCA AACCGGACGC GGCAATTAGT CCCGATACTA CGCCGTCGAA ACCAAATTCG
TTTTCGGGAA CGTTGATAGT GTCCGAAATT TTTCAGGAAA CCCCAAACGT CAAGACCTTC
CGACTGACCG ATCCGGGGGG AGGCAAACTG CCGTTCAACT ACCTGCCGGG GCAGTTTATC
ACGGTAGCGG TAACGCCAAA CGGCATTCCC CTCAAACGGT CCTATACCAT TGCTTCCTCG
CCGACGCACC GGGATTACTG CGAAATTACC GTCAAACAGG AAGAGTTTGG CACCGTGTCG
CGGTATCTGA ATACGGAGGT TCACACAGGC GAGTTGCTGC AAGTCACCGG GCCGTCGGGC
AAATTTACAT TTACCGAAAC ACATGCCAAA AGTGCGGTGT TCATTGGGGG TGGTGTCGGT
TTAACGCCCA TGATGAGTGC CATCCGCTAT TTAACCGACC GCTCCTGGAA AGGGGAAATT
TATTTTTTCT TCTCCTGCAA AGATGAGGGC AACATTATTT TCCGGGAAGA ACTACTATAC
CTGCAAAAGC GGTACTCCAA TTTGCACGTA TTTTTTGTAC TCAGCCGACA GCAAGGCGTG
GCCAGTGTTG ATTTTATCTC CGGTCATATC ACCAAAGAAC TATTGGCTGA ACGGGTGCCG
GGTATTGTAT CCCGCATGGT TCACATCTGT GGACCAAAGG TCATGATGGA TGCAGTAATT
CTAATGTTGG AAGAACTGAA AGTGCCGAAA GAAAATATTA TGCAGGAGGT ATTTGCAGGT
TCGCCACCTG TTGCCAAGAC TCCGTCACTA GCAACCGATG GACCTGTAAA ACCGCCAGAT
GGTAAAGAAG CAGAACAACC GGCTGCATCC GAAGTAGGAG AAGCTGCGGT GACTGAAAAC
GGACAACCTG CTGTACCTGA AACACCAGCC AATACGGCGG TTATCACCTT TGCCAAATCG
AACAAAACGG CCCTGCTGAC ACCCGATAAA ACGGTACTGG AAGCGTCGGA AGATATTGGG
GTAAATATTG ATTATTCGTG CCGCGTCGGG ACGTGCGGAA TCTGCAAAGT CAAGCTATTG
TCGGGTAACG TGACGATGGC GGTTCAGGAC GCGCTGACCG ACGAGGACAA GGCGCAACAG
ATTATTCTGG CGTGTCAGGC CAAAGCAACC GCACCTGTAT CAGTAGAAGC CTAA
 
Protein sequence
MLLPALLLGG TSVTNAQSEH EQHHPQASAA PMSGTETAMS SGTTATDSGG AKGVIAGGAK 
GGIMAEMGEM MKEMGKVAPM ALYPTLMQMP ELVPEKRDAI RQASDAWISE GNALMASGLR
KLSDAVQSRN QDLDVKRAAT EEIRQGQRLL ESGFSAQRAL AENEDPRTLA LQWFNREMRL
TPTGQDDEPP GIGDLSWFHI ITMLTLIMFA TTMIWMYFQK MKRANALVEK LGGKSDETIP
PSGGAKPDGS IAPALPSGGL APAPKPEPVA AISPAPTSPT PFAKPDAAIS PDTTPSKPNS
FSGTLIVSEI FQETPNVKTF RLTDPGGGKL PFNYLPGQFI TVAVTPNGIP LKRSYTIASS
PTHRDYCEIT VKQEEFGTVS RYLNTEVHTG ELLQVTGPSG KFTFTETHAK SAVFIGGGVG
LTPMMSAIRY LTDRSWKGEI YFFFSCKDEG NIIFREELLY LQKRYSNLHV FFVLSRQQGV
ASVDFISGHI TKELLAERVP GIVSRMVHIC GPKVMMDAVI LMLEELKVPK ENIMQEVFAG
SPPVAKTPSL ATDGPVKPPD GKEAEQPAAS EVGEAAVTEN GQPAVPETPA NTAVITFAKS
NKTALLTPDK TVLEASEDIG VNIDYSCRVG TCGICKVKLL SGNVTMAVQD ALTDEDKAQQ
IILACQAKAT APVSVEA