Gene Slin_6893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6893 
Symbol 
ID8716159 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp63272 
End bp66097 
Gene Length2826 bp 
Protein Length941 aa 
Translation table11 
GC content53% 
IMG OID 
Productmulticopper oxidase type 3 
Protein accessionYP_003391639 
Protein GI284005820 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones63 
Fosmid unclonability p-value0.845063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAACA CCTTTCTTAG GACAGTAAGC CTGCTGATAT TGCTACAAAC AGTCAGTTAT 
GGGCAACACC AGCAGCATAC GATGGCCGCT GGCGATCAGG CAGCCAAGCC ACCGGCTAAT
CCCGACAAAT CAAACTTTCC GGTCGTTAAA ACATCCCTGC CCGTCTCCCG GCCCCAAGCC
CTTGCCCGCG TGAAACCAAC GGGTAAGCGG GTCGAGTATG ACCTCACCAT TGACGAGCAG
ACGGTCAATA TTACGGGCAA GCCGAAGAAG GCCATGACCA TCGATGGGGG CATTCCTGGC
CCGACGATGC GGTTTACCGA AGGCGATGTG GCCGTTATTC GGGTACATAA CAAATTAAAA
ACCGAAACCT CATTGCACTG GCACGGACTG CTGGTGCCCA ACATTCAGGA CGGTGTGTCA
TACCTGGAAA CCCCACCCAT TCTGGCGGGC ACAACTCGCA CATTTGAATA CCCGCTGGTT
CAGTCCGGCA CCTACTGGTT CCATTCGCAC ACCCGCTACC AGGAACAGGT CGGGGTGTAT
GGTTCTATAG CCATTCAACC TCAGCAGCTC ACCCACAAGG TGGATCATGA TCTGGTGTTG
TTGCTGTCGG ATTGGACGAA CGAGAATCCG GCGTATATTC TGAAAAACCT AAAACGGCGC
AACGAGTGGT ACTCCATCAA AAAAAATAAT GTCCAATCGC TCAACCGCAT TATTCAGCAC
AAGGCGGTAG GGGCGTACCT ACGGCAGTCG ATGATGAAGA TGGCCCCGAT GGATATATCG
GATGTATACT ACGACCGATT CTTGGTAAAT GGGAAAGACA CCGTGCGTTA CCCGGAAATC
AAGGCTGGTC AAACAGTCCG ATTGCGGGTC ATCAACGCCA GTGCGTCCAC CTATTTTCAC
GTCAATTATG CCGGCGGTCC CATGAAACTG ATTTCCGCCG ATGGGCTGGA CGTGCAGCCG
GTAGACGTTG ACCGGCGGCT GATTGCCATT GCCGAGACCT ACGACTTTAT TGTCACGGTA
CCAAAAGGGG GAGCTTTTGA AGTGCGGGCC ACCGCTCAGG ATGGGTCTGG CTACGCAACG
GCCTTGCTCG GAAATGGCCC GGCGAAGTAC GCTCCGACGA TTCCCCGTCC TGACCTCTAC
AAATTAACAG CCAACATGAG CCAAATGGGA GGCATGGGCA TGGGGACGAT GAACATGGGC
AAAACCGATA CGACCGCCCA GGCGAATGTG GACATGAACG GCCCCATGAT GCACGATAGG
CCCGGCATGG ATTCCAAACC CGGCAAAGCC GAGTCCGCTA TGGGTCAAAT GGATCATAGC
CAAATGGATA TGGGACAGGG TAAACAGGCA AAACCGGCCC CCGCTACGCC CAAAAAGCCC
GATTCGATGA CCGGCATGGA TCATAGTGGC ATGGCCGGGA TGGACCACAG CCAGATGGAT
ATGGGTGCGA AGCCCTCAGC CAAGAAGTCG GCTTCGGCAA AAAAAGCCAC CAAGCCAGCA
AAAGCGGCTG GCTCAATGGA GGGCATGAAC CACAGCGGTA TGAAGATGGA TATGGCCGGG
ATGAACATGC GCAAAGATGG CAAAATGGAC ATGACGGGGA TGGACCACGG GCAGATGAAT
CAATCATCCA TGCCGGGTAT GGATCATAGT AAAATGTCCA TGAAAATGGA TTCAATGCCC
GCTAGGAAAA CAGACGGCAA AAAGCCAGAT TCGATGGCTG GCATGGATCA CAGCCAGATG
AATATGGGTA GCAAAGCCGG TACTATGGCC GGGATGAAGG GAAAGGATCA TGGAGGAATG
GCCGGTATGA GCATGATGGA CGAGCAGAAT ACCATCGACT ACAGCATTCT CAAGTCGCCC
GAACCCATTG TGTTTCCCAC TAACCGCCCG ATTCGGGAAA TCCCGCTGAC GCTGACGGGG
AATATGTTCC GCTACATCTG GGGCTTCAAC GGGCAACCCC TGTCACGGGC CGATATGATT
CAGATTCGGC GGGGCGAGAT TGTGCGTATC CGCATGATGA ATAACACGAT GATGATGCAC
CCTATTCACC TGCACGGGCA CTACTTCCGG GTGTTGAACG GGCAGGGGCA GTATTCACCC
CTGAAGCATA CGGTGAACGT ATCGCCCATG GAGAGCGTCA CGATTGAGTT TATGGCCGAT
GACGAGAAAG ACTGGTTTTT TCACTGCCAC CTGCTCTATC ATATGCTCAG TGGCATGGCC
CGCGTGGTCA GCTATGGCGA CAAACCAGAC TCGTCCATTG CCAACATCCA GAAACAGCAC
ACACGCGATA TGCGTGACAA CCAGCCGTTT ATTTGGGGTT ATCTGCAACC CGGCTATCCA
ATTAACTACT TTAACCTGAA CATTTCTAAC AACAAAAACG CCATCGTTGC GGGTGGAGAT
CATGACTGGC GCACGAACCG CTTCGAGTTC GACTTAGACT ATGAACGCTA CCTCGGCGAT
TGGTTCCGCG TGTTTGCCGG GATTGACGGC GGTAATGAAG AGTTTCTGCG CCGGGTACGG
CCCGAAGATG GGGTAGCCAC CGACCGGCGC ATCGTTCGAG CCGTGGCGGG TATTCGGTAT
ATGCTGCCGT TTCTCATTCA ATCGGAAGTA AAACTCGACA CGCGCGGTAA CGTCCGGTTC
CAGCTTAATG GACAGCAAAT GTTGTTTCCC CGCTTAGATT TTCAGTATCA GACGCAGTGG
TTAGTGGGCA GTTACCTGCG GGCGCACGTG GAACTGCAAT ACACCGTTAC CAAAAATCTG
TTTCTTCATA CGGATTACGA CACCCGGTAC AAAGCCTTTG GTGGCGGACT GGGGTATAAT
TTCTGA
 
Protein sequence
MKNTFLRTVS LLILLQTVSY GQHQQHTMAA GDQAAKPPAN PDKSNFPVVK TSLPVSRPQA 
LARVKPTGKR VEYDLTIDEQ TVNITGKPKK AMTIDGGIPG PTMRFTEGDV AVIRVHNKLK
TETSLHWHGL LVPNIQDGVS YLETPPILAG TTRTFEYPLV QSGTYWFHSH TRYQEQVGVY
GSIAIQPQQL THKVDHDLVL LLSDWTNENP AYILKNLKRR NEWYSIKKNN VQSLNRIIQH
KAVGAYLRQS MMKMAPMDIS DVYYDRFLVN GKDTVRYPEI KAGQTVRLRV INASASTYFH
VNYAGGPMKL ISADGLDVQP VDVDRRLIAI AETYDFIVTV PKGGAFEVRA TAQDGSGYAT
ALLGNGPAKY APTIPRPDLY KLTANMSQMG GMGMGTMNMG KTDTTAQANV DMNGPMMHDR
PGMDSKPGKA ESAMGQMDHS QMDMGQGKQA KPAPATPKKP DSMTGMDHSG MAGMDHSQMD
MGAKPSAKKS ASAKKATKPA KAAGSMEGMN HSGMKMDMAG MNMRKDGKMD MTGMDHGQMN
QSSMPGMDHS KMSMKMDSMP ARKTDGKKPD SMAGMDHSQM NMGSKAGTMA GMKGKDHGGM
AGMSMMDEQN TIDYSILKSP EPIVFPTNRP IREIPLTLTG NMFRYIWGFN GQPLSRADMI
QIRRGEIVRI RMMNNTMMMH PIHLHGHYFR VLNGQGQYSP LKHTVNVSPM ESVTIEFMAD
DEKDWFFHCH LLYHMLSGMA RVVSYGDKPD SSIANIQKQH TRDMRDNQPF IWGYLQPGYP
INYFNLNISN NKNAIVAGGD HDWRTNRFEF DLDYERYLGD WFRVFAGIDG GNEEFLRRVR
PEDGVATDRR IVRAVAGIRY MLPFLIQSEV KLDTRGNVRF QLNGQQMLFP RLDFQYQTQW
LVGSYLRAHV ELQYTVTKNL FLHTDYDTRY KAFGGGLGYN F