Gene Slin_6892 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6892 
Symbol 
ID8716158 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp62621 
End bp63148 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content50% 
IMG OID 
Productprotein of unknown function DUF305 
Protein accessionYP_003391638 
Protein GI284005819 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones56 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCGC ACAAGCAACA CACGGGCCAC GCCCAACCTT CTCAACCCGG TCATGCTATG 
TCTGATCATG GGGCGGGTAA CGGAAATCAG TATGGAAAGC TGGCCGTCAT GGGTGTATTA
TCCTTTATTT CCATGTACGT GCTGATGTAT TCGATGGTTG ATCGGTTTGC CAACATCATT
CCGAACGTCA ATCAGTTTTA CATGGCAGGC CTGATGACCA TGCCCATGAT TATCATCGAG
GTGCTGGTTA TGTCGGCGAT GTACATGGAT AAATGGCGCA ATGCCCTCGT TATCGCCGTC
AGTGCCGTTG CGCTCGTCGG CTTCTTTCTG CTGATCCGTC AGCAGGGTTT CGTTGGCGAT
AAAGAGTTCG CCAAGTCCAT GATTCCACAC CATGCTGCGG CTATTCTGAT GGCTAAAGAA
GCGAAGCTGA CCGATCCTGA GCTGCAAAAA CTTCAGCAGG ATATTATCAC GGCCCAGGAG
AAGGAAATAA AGCAAATGAA GGATAAGCTG GCTGAGTTAG ATAAGTAG
 
Protein sequence
MEAHKQHTGH AQPSQPGHAM SDHGAGNGNQ YGKLAVMGVL SFISMYVLMY SMVDRFANII 
PNVNQFYMAG LMTMPMIIIE VLVMSAMYMD KWRNALVIAV SAVALVGFFL LIRQQGFVGD
KEFAKSMIPH HAAAILMAKE AKLTDPELQK LQQDIITAQE KEIKQMKDKL AELDK