Gene Slin_6889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6889 
Symbol 
ID8716155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp59233 
End bp59835 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content52% 
IMG OID 
Producttranscriptional regulator, AraC family 
Protein accessionYP_003391635 
Protein GI284005816 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones61 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAACGC GTAGCCAGCC TTTACCAACC AACGAAACAC CACTCGCGAT CCGGGGCATG 
GTCTGTGCCC GGTGTATGGA TGTGGTTCGA CAGGAACTGG AAGACTTGGG CTGGGAAGTA
ACTCAGGTGC GACTGGGGCA GGTGCAGGTA CGTGGCCAGG TATCCCCGGA CGAGTTGGCC
CGGATTCAGG CCGTTCTGGA AAAACAAGGC TTTTCATTGG TATCGGACGC TAAAGTGACG
CTTATACAAC GCATTAAAAC CCTTATTGAG CAGACGCTGA ACCGCGATGA TTTAAGTGAG
CGAAAGATCA GGTTTTCTGA TTTTCTCGCT ACCGAACTGA GCATGAGTTA TGATACGCTG
AGTGCCCTTT TTTCGGCCAG CGAGGGCCAA ACGCTCGAAC GCTACATCAT TGAACGACGG
TTGGATAAGG TCAAAGAACG CTTGGTGTAC AGTGATTTAT CCCTGAGCGA GATAGCGCAT
CAGACGGGGT ATAGCAGCGT TCCTCATTTG TCGAACCAGT TTAAACGGCT GACAGGTCTC
TCCCCGACCT TTTTCCGCAC CGTTCGGCGC GATAAACAGG CTCTCCAGCA GCAGACAGGG
TAA
 
Protein sequence
MITRSQPLPT NETPLAIRGM VCARCMDVVR QELEDLGWEV TQVRLGQVQV RGQVSPDELA 
RIQAVLEKQG FSLVSDAKVT LIQRIKTLIE QTLNRDDLSE RKIRFSDFLA TELSMSYDTL
SALFSASEGQ TLERYIIERR LDKVKERLVY SDLSLSEIAH QTGYSSVPHL SNQFKRLTGL
SPTFFRTVRR DKQALQQQTG