Gene Slin_6885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6885 
Symbol 
ID8716152 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp54270 
End bp55511 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content53% 
IMG OID 
Productfatty acid hydroxylase 
Protein accessionYP_003391632 
Protein GI284005813 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones50 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones74 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAC GCATCACGCT ACTCCGCTAC CTACTCTATC CGGTTATCTG GGCAGGCTCC 
TTCCTGCTTA TTGTCGCGCT GCTGGTGGCT GGCATCAATA CCTATCTGGC TACGCTCCCT
GTTATTGCCG GGGCCGCCAT TGTGGTGTTA CTGCTGGAAC GGGCATTGCC CTACGAAACC
GAGTGGTTAC GCACCAAACA TGGCGATTTG AACCTCGATA CAGTTCACTT CGTGGTCAAC
TACGGCATAA AAGTGGTGGC CCAGTTGATG ATTCTCTGGC TGGGGCAGTC GCTAATTTTG
TGGGCCATTT TTCCAACCTA CTGGCCGTTG TGGGTGCAGG TGCTGCTGGC TCTGGCCCTC
ATCGACTTCT TTCTGTTTGC CGTTCACGCG CTCAGTCACC GTTACGAGTG GCTGTGGAAG
CTGCACGCCA TTCACCACAG TTCCGAGCGG CTTTACTGGC TGAACGGCGA CAAACGACAT
CCGATTCATC AGGTGCTGGA AGGGTTGCCG GGTATTATCC TATGCGTACT GATCGGGGCA
CCCATGCCCG TCATTGCGGG AGCTTTGGCC GTGCTGACCG TCAACATGAT GCTGCAACAC
GCCAACATCG ACTACCGGGC CGGTTGGCTG AAACACCTCT TCAGCGTGGC CGAACTGCAC
CGCTGGCACC ACCGGGCCGA CTACAAAGAC GCTCAGGTTA ACTACGGGGC CTGGCTGGTT
ATCTGGGACA AGCTCTTCGG CACGTACTAC GACGCACCGA GCCAGGCTGA ACAGATTGGG
CAGATCGGCA TCGCCGAAGA ACCTGATTTC CCACGTACCT ACACGGGGCA GCTTCGATAC
CCTTTTCGTC CTGGTACTAA ACAAGTGAAT TCACTGCTTT TGGCCATTGG ACTAAGCTTC
TCTTTTCTGT CGTTTCAAAC TCCTGAAGAT AGCCTTTTGG GCACGTGGCG TGCGACCGAC
GGTAACGACA TCAGCATCTA TCGGAAAGGC GAGCAATACG ACGCTAAACT TACCCATGTA
TCGAAACCGG AGCTACGCAA TCAATTGGGC AGTATAGTTA TTTGGGGTAT GCGTTATGAC
AAGAAACGAA ATGAATGGCG TGGAGGTCAA CTAAAAATGC CGGGTATGGA ACACATGGCT
GAAGCTTTCA TACGACTTAG TAATCAGCAA CTGACGATCA CGGGGTATCA TGGTCTGCGC
TGGTTGGGGA AAAGCCAGAC GTTGACACGT GTAAAAGAAT AA
 
Protein sequence
MNKRITLLRY LLYPVIWAGS FLLIVALLVA GINTYLATLP VIAGAAIVVL LLERALPYET 
EWLRTKHGDL NLDTVHFVVN YGIKVVAQLM ILWLGQSLIL WAIFPTYWPL WVQVLLALAL
IDFFLFAVHA LSHRYEWLWK LHAIHHSSER LYWLNGDKRH PIHQVLEGLP GIILCVLIGA
PMPVIAGALA VLTVNMMLQH ANIDYRAGWL KHLFSVAELH RWHHRADYKD AQVNYGAWLV
IWDKLFGTYY DAPSQAEQIG QIGIAEEPDF PRTYTGQLRY PFRPGTKQVN SLLLAIGLSF
SFLSFQTPED SLLGTWRATD GNDISIYRKG EQYDAKLTHV SKPELRNQLG SIVIWGMRYD
KKRNEWRGGQ LKMPGMEHMA EAFIRLSNQQ LTITGYHGLR WLGKSQTLTR VKE