Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6881 |
Symbol | |
ID | 8716148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013732 |
Strand | + |
Start bp | 49374 |
End bp | 50627 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003391628 |
Protein GI | 284005809 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 0.822628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCCTT TTGCCCGTGT TGCCCGACGA TATTGGTATG CACTGCTCGC ATTTTTCGTA CTGTCCGTTA TATTTTCCAT TCGTGAAGCT CAGACACAGG ATGCCAACGG AGATGCTTAC ATCTACTGGG CCGTTGGGGG TAAGTTTTTA AACGACCAGC CGCTTTATGA CCCGGTTCCC GGATCACAGG AGTTTCTATA TCCGCCAATA GCCGTTCTGT TTTGCCAGTT TTTGGCTTTA TTCCCCTTTC CGGTAGCCGT TGGGCTATTT ACGTTTCTTA ATTTTATGGC ATGGCTGGCT TTGCTATGGC TTACTTACCG CTTTTTGGGT ATCTACTTTC CCGGAGCCGC CTTGCAGTCG GCTATGCTGG TTGGGGCTGT GGCAACAATT CGTTATTTCT GGCATAATAT TGTCTGGGTA AATGTTAACG AACTGGTCGC CCTGGCCAGC ATTGGGGGGC TTTATTGGTA TCTGAAAGGC CGGCAAACCA TTGGCTTAGG GTTGCTTACG TTAGCCACCT GGGTGAAAGT AATGCCCTTG TTACTCATCG GAATACTGTT CATTCGCAGG CCCCGGCACA CAATTAGTTG GGTGCTGGTA TTTAGCGGTT CGTTTGCCAT TATTCTGTTT GGATTTAGAG GTGTAAGTCA GGGTGTTCAG GATCATTTCG ACTACTGGCA TATTACGTTT AGGCCGTTTT TGCTGGGCGG TAAGGTCTTT ACCGACTGGA TTGCTTTCGG TATATCGGCT ACCTTGTCGA AGCTGCTGAC AGCCCACCCC GATATTAATG GTGTTCGGTA TCATATCGTG AGCTGGCCTC CGGCGTTAGT CGGAAAAATC AGTCTGGTCA TACGCCTGAT TCTGGTCAGC ACAACGTATT ACTATGCGTG GCGTACACGT CGACAGAAAA TAGTACCCCT ATCGGTGTTA CTAACTACCT ACCTGACGAT GCTTTTGGTA GCTGGTGTTT CCTGGGAGGG CCATCATGTT ACGTTGCTGC TGGTTATCAC GGGCCTGTAC CAGCGCCTGA CTGAGATAGG ATTGCTTCGG TTACGGCGGT GGTTTGCCAT AATCAGTATC GGCGTTGGGC TGATGACCAG CGACCTGTTG GGAAGCCATC TGTCTGATTA TGTGCAGGCA TTCAGCCTGA TTACCTACAA TGTATTGTTT CTATACATAA TCGCTGTGTG GGTTAATCAA CGGTTGACAA CGACAGAACA TCAAATAAGT ATGAACACGA CAACGGCTGT GTAA
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Protein sequence | MTPFARVARR YWYALLAFFV LSVIFSIREA QTQDANGDAY IYWAVGGKFL NDQPLYDPVP GSQEFLYPPI AVLFCQFLAL FPFPVAVGLF TFLNFMAWLA LLWLTYRFLG IYFPGAALQS AMLVGAVATI RYFWHNIVWV NVNELVALAS IGGLYWYLKG RQTIGLGLLT LATWVKVMPL LLIGILFIRR PRHTISWVLV FSGSFAIILF GFRGVSQGVQ DHFDYWHITF RPFLLGGKVF TDWIAFGISA TLSKLLTAHP DINGVRYHIV SWPPALVGKI SLVIRLILVS TTYYYAWRTR RQKIVPLSVL LTTYLTMLLV AGVSWEGHHV TLLLVITGLY QRLTEIGLLR LRRWFAIISI GVGLMTSDLL GSHLSDYVQA FSLITYNVLF LYIIAVWVNQ RLTTTEHQIS MNTTTAV
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