Gene Slin_6881 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6881 
Symbol 
ID8716148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp49374 
End bp50627 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content48% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391628 
Protein GI284005809 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value0.822628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCCTT TTGCCCGTGT TGCCCGACGA TATTGGTATG CACTGCTCGC ATTTTTCGTA 
CTGTCCGTTA TATTTTCCAT TCGTGAAGCT CAGACACAGG ATGCCAACGG AGATGCTTAC
ATCTACTGGG CCGTTGGGGG TAAGTTTTTA AACGACCAGC CGCTTTATGA CCCGGTTCCC
GGATCACAGG AGTTTCTATA TCCGCCAATA GCCGTTCTGT TTTGCCAGTT TTTGGCTTTA
TTCCCCTTTC CGGTAGCCGT TGGGCTATTT ACGTTTCTTA ATTTTATGGC ATGGCTGGCT
TTGCTATGGC TTACTTACCG CTTTTTGGGT ATCTACTTTC CCGGAGCCGC CTTGCAGTCG
GCTATGCTGG TTGGGGCTGT GGCAACAATT CGTTATTTCT GGCATAATAT TGTCTGGGTA
AATGTTAACG AACTGGTCGC CCTGGCCAGC ATTGGGGGGC TTTATTGGTA TCTGAAAGGC
CGGCAAACCA TTGGCTTAGG GTTGCTTACG TTAGCCACCT GGGTGAAAGT AATGCCCTTG
TTACTCATCG GAATACTGTT CATTCGCAGG CCCCGGCACA CAATTAGTTG GGTGCTGGTA
TTTAGCGGTT CGTTTGCCAT TATTCTGTTT GGATTTAGAG GTGTAAGTCA GGGTGTTCAG
GATCATTTCG ACTACTGGCA TATTACGTTT AGGCCGTTTT TGCTGGGCGG TAAGGTCTTT
ACCGACTGGA TTGCTTTCGG TATATCGGCT ACCTTGTCGA AGCTGCTGAC AGCCCACCCC
GATATTAATG GTGTTCGGTA TCATATCGTG AGCTGGCCTC CGGCGTTAGT CGGAAAAATC
AGTCTGGTCA TACGCCTGAT TCTGGTCAGC ACAACGTATT ACTATGCGTG GCGTACACGT
CGACAGAAAA TAGTACCCCT ATCGGTGTTA CTAACTACCT ACCTGACGAT GCTTTTGGTA
GCTGGTGTTT CCTGGGAGGG CCATCATGTT ACGTTGCTGC TGGTTATCAC GGGCCTGTAC
CAGCGCCTGA CTGAGATAGG ATTGCTTCGG TTACGGCGGT GGTTTGCCAT AATCAGTATC
GGCGTTGGGC TGATGACCAG CGACCTGTTG GGAAGCCATC TGTCTGATTA TGTGCAGGCA
TTCAGCCTGA TTACCTACAA TGTATTGTTT CTATACATAA TCGCTGTGTG GGTTAATCAA
CGGTTGACAA CGACAGAACA TCAAATAAGT ATGAACACGA CAACGGCTGT GTAA
 
Protein sequence
MTPFARVARR YWYALLAFFV LSVIFSIREA QTQDANGDAY IYWAVGGKFL NDQPLYDPVP 
GSQEFLYPPI AVLFCQFLAL FPFPVAVGLF TFLNFMAWLA LLWLTYRFLG IYFPGAALQS
AMLVGAVATI RYFWHNIVWV NVNELVALAS IGGLYWYLKG RQTIGLGLLT LATWVKVMPL
LLIGILFIRR PRHTISWVLV FSGSFAIILF GFRGVSQGVQ DHFDYWHITF RPFLLGGKVF
TDWIAFGISA TLSKLLTAHP DINGVRYHIV SWPPALVGKI SLVIRLILVS TTYYYAWRTR
RQKIVPLSVL LTTYLTMLLV AGVSWEGHHV TLLLVITGLY QRLTEIGLLR LRRWFAIISI
GVGLMTSDLL GSHLSDYVQA FSLITYNVLF LYIIAVWVNQ RLTTTEHQIS MNTTTAV