| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6878 |
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| Symbol | |
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| ID | 8716145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013732 |
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| Strand | + |
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| Start bp | 44867 |
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| End bp | 46288 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_003391625 |
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| Protein GI | 284005806 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 71 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCTGCC TCGTCGGACT TGCCCTGCTT CTGCTGGCAG GCTGCCAGGC AAACAACGAC
AACAAAGAAG TAACGGCACC AGCTAACCCA AATCAGACAG GCCATCAGCA TGGTACAGCG
GGGGCGGTTG AGTCGGACCA CGACGAATAT ACCTGCCCCA TGCACCCACA AATTGTGCAG
GACAAGCCTG GTTCGTGTCC CATCTGCGGA ATGGATCTGG TGACAAAAGT GACCACTGGT
GGCGACAGCC TGACGGTCAA TGCCGACCTC AAAGCCCTGT TACAACCCAC AAACTCGGTG
GTAGTGGCTA ACATCGCGAC CGTGCAGCCC GAACAGCGCA CGGCCTCGGT ATCCGTGCAG
GCCAACGGCA TTGTGACCTA CGACACCCGG CGGCTCTACT CGATTCCGGC CCGGTTTGGC
GGTCGGGTCG AAAAGCTGTA TGTCCGGGTC AACTACCAGC CCATCCGTAA AGGCCAGAAA
CTACTCGAAC TCTACAGCCC CGACATCGTC ACGGCCCAGC GCGAACTGCT CTATTTACTC
GATGCTGACG CGGGGAATGC CCCCCTGATT GCCGCAGCGA AGCAGAAGCT ACGGCTGCTT
GGCTTAACCG ACGGGCAGAT TGACGAACTA ACCCGCAGCC GGAAGCCTAG CTACGCGCTG
GCCGTGTACA GTCCCTATGA CGGGTACGTC GTTGAAGAAT CGGCGGGTGC GCCGTCGGGG
CAGTCCGGCG ATCCGGCTAT GCCTGCTGCT GGCGGCATGG GTAGTGCCGG AGCCAGTGGT
GGAATGGGGG GCGGTATGTC GGGCGGGGGA ACCCCGCCGA CTACGGATGA AATCACGTTC
GCTACACCAA CTCCCGCGCC GGGGAGTGGG GCCGCCGGTG GTTCGTTGCT ACTCCGCGAG
GGGCAATATG TACAAACCGG ACAAACCTTA TTCCGGGTGG TTAACCCCAG CCGGTTGTGG
GCCGAGTTTC GGCTCTACGC CCGCGATGCG GTTGGCATCA AACCCGGCGA CGAACTGACC
ATTTCGTTCG ACCAGACGGG CGAGGCTATG CGCCGGGCGC GGGTCAGTTT TGTGGTGCCT
TTCATCGAAG GAAACGGACA GTTCGTTACG GTACGGGCGT ATCTGCCGGG GGGTAACTCC
GTGCGGGTAG GCCAACTGGC CCGCGCTACG CTTCGGCGGT CGGGCGTAGA GGAGCTTTGG
CTACCCGCTA CGGCCATACT CGATTTAGGC AACGAGCAGG TCGCCTTTGT GCAACAGCAA
GACGCTTCCA ATACCTTCCG GCCCGTGCGG GTACAGACCG GCCAGCAGGC AGGTGGGTAC
ATTGCCATTA CAAAAGGGCT GACCGATGAG CAGGTTGTTG CCCGCAATGC CCAATTTTTA
ATTGACAGCG AAAGTTTTGT CAACGCAGCA ACCACGAAAT AG
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| Protein sequence | MACLVGLALL LLAGCQANND NKEVTAPANP NQTGHQHGTA GAVESDHDEY TCPMHPQIVQ
DKPGSCPICG MDLVTKVTTG GDSLTVNADL KALLQPTNSV VVANIATVQP EQRTASVSVQ
ANGIVTYDTR RLYSIPARFG GRVEKLYVRV NYQPIRKGQK LLELYSPDIV TAQRELLYLL
DADAGNAPLI AAAKQKLRLL GLTDGQIDEL TRSRKPSYAL AVYSPYDGYV VEESAGAPSG
QSGDPAMPAA GGMGSAGASG GMGGGMSGGG TPPTTDEITF ATPTPAPGSG AAGGSLLLRE
GQYVQTGQTL FRVVNPSRLW AEFRLYARDA VGIKPGDELT ISFDQTGEAM RRARVSFVVP
FIEGNGQFVT VRAYLPGGNS VRVGQLARAT LRRSGVEELW LPATAILDLG NEQVAFVQQQ
DASNTFRPVR VQTGQQAGGY IAITKGLTDE QVVARNAQFL IDSESFVNAA TTK
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