Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6877 |
Symbol | |
ID | 8716237 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013732 |
Strand | + |
Start bp | 43489 |
End bp | 44850 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | Outer membrane protein-like protein |
Protein accession | YP_003391624 |
Protein GI | 284005805 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 71 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGCTGGA AGCCTCTCAC TAACGGGCTG CTTGCCGCGC TGCTGGCAAC GCAGGTTGTA TTCAGCCAGA CGCAGCCTCT GCCAACATTG CCCCAGCCGA AACCATCAGC CGTGCAGTCG CTGACGGGGA CTGACCAATA CGTGCGGCCT TCGGCCACTG TCTCATCAGG CCCGGTGCTG GCCTTAGACA GTGTACTGAC CCACATCGAC CAGTACAATC CGTTGCTAAA ACCATTTGGC AGTCGGGCCG CTGCCGCCCG CGCTTACGCC GAGGGCGCGC GTAGCTGGAT GGCCCCGATG GTGGGCGTGG GTACGTTTAT GGCACCGTAT CCGATGCAGA TGATTATGGA CGAGCGCGAT AAGGGCTTCG GGATGGTGTC TGTCGAGCAG GATATTCCGA ATCCTTTTAA GCAACGGGCT ACCCGCATCT ACCAGCAATC GAAAGCAGGC GTAGAAGAAG CCGGGCGGGG CATCACGCTC AACCGGCTGC GCTCCGATGC CAAGCAACTC TATTTCGACT GGCTCGTGCT GGAAAAACGG CGGGGGGTGC TGGCCGAAAA TAAGCGCATT CTGCAATTGA TGAAAAAGCT GGCCGACATC CGCTACCCCT ATCAACAGGG CAGTTTGGGC AATATCTACA AGGCGGAAGG GCGGCTCTAC GAACTGGACA ACATGGTCAC GATGACCGAG GCCGAAATTG AGCGCAAACG CATCGGGCTG AATACGCTGA TGAACCGGCC CAAAACTGAA CCGTTCCAAA TCGACACGAC CTACCGCCCG GCACAGCCTC AGCCCGTTGT TCCGACAACC GAAGAGATTG GTGGCCGACG CAGCGATATT CTCCGCATGG ACAAACAGAT TCTGAGTATG CAGGCGGGTA TCGAATCGCA GAAAGCGCAG GCCCGGCCCG ACTTCCGCAT CCGTTTCGAC CATATGCAAC CCTTTTCGGG CGTGAAGAGC ATGATGCCCA CCCAGTTTAC GCTGATGGGC ATGATTTCGA TACCGATTGT ACCCTGGGCC TCCCGGATGT ACAAAGCCGA GATCAAGGGA ATGCAGCAGG ACATTGAAGC CATGCGCTAC GAACGCGAAG GCATGCTCAA CGAAACGCAG GGCATGGTAG CCGAGATGCT GACCGACATA CGGAACATGA ACATTCAGTT GGCAAATTAC GAACGGCGGG TCATTCCGAC GCTTCGCAAA AACTACGATA CCCAACTGAT TAACTACGAG CAGAATAAAG GCGAACTACC CCTCGTCATT GATGCCTGGG AAACGCTGAA TATGACGCAG ATGGACTACC TGACGCGCCT ACAAGACTAT TATCGCATGA TTGTGAGCTA TGAGCGAGAA CTGGAGAAAT AA
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Protein sequence | MCWKPLTNGL LAALLATQVV FSQTQPLPTL PQPKPSAVQS LTGTDQYVRP SATVSSGPVL ALDSVLTHID QYNPLLKPFG SRAAAARAYA EGARSWMAPM VGVGTFMAPY PMQMIMDERD KGFGMVSVEQ DIPNPFKQRA TRIYQQSKAG VEEAGRGITL NRLRSDAKQL YFDWLVLEKR RGVLAENKRI LQLMKKLADI RYPYQQGSLG NIYKAEGRLY ELDNMVTMTE AEIERKRIGL NTLMNRPKTE PFQIDTTYRP AQPQPVVPTT EEIGGRRSDI LRMDKQILSM QAGIESQKAQ ARPDFRIRFD HMQPFSGVKS MMPTQFTLMG MISIPIVPWA SRMYKAEIKG MQQDIEAMRY EREGMLNETQ GMVAEMLTDI RNMNIQLANY ERRVIPTLRK NYDTQLINYE QNKGELPLVI DAWETLNMTQ MDYLTRLQDY YRMIVSYERE LEK
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