Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6860 |
Symbol | |
ID | 8716128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013732 |
Strand | + |
Start bp | 27395 |
End bp | 28471 |
Gene Length | 1077 bp |
Protein Length | 358 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | 40-residue YVTN family beta-propeller repeat protein |
Protein accession | YP_003391608 |
Protein GI | 284005789 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 73 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTAAGT ACACTAAACT GGTGGCATTA CTGCCGCTTA TCCCCCTGGC AGGTTGCATG AACATGGACA ACATGAACGC AACTCAGCCA ATGCTGAACA TCAACTACCC AGCCGCCTAC GTGGTCAATG CTGAGGGAAA CAGCCTGTCG GTTATTGACT TAACCGGGCA ACAGGTGAAA GAAACTATTT CGTTTGGGGA CGCTTCTATG ACCGGCATGA ACATGAGCAA CATGATTATG TGGCCGCACC ATATTTACCT TTCGCCCGAT GGCAGCAAAC TGGGCATCGG TGTGCCGGGC ATGGACCTCA GTGCCGGGCA TACGGGGGGA ACAACCGGAA TGAATGGCCG CGTACTGGTG GTCAACCCGG TAACGGGCCA AACAGCCCAA AACCAGCAAA CTCCGGTGAT GAACCATAAC GCCGTTTTCT CCGCCGATGG AACTGAAATC TGGACTTCCC AAATGGATAT GACGGGCAAG GTACTGGTTT ATAACGCCAG TACAATGGCT CTGAAAAATA CCATTACGGT CGGTATGGAA CCCGCCGAGG TAACGATGTC GTCCAATGGG CAATATGCGT TTGTTGCTAA CGGCATGAGC AATTCAGTGT CTGTCATTAA AGTTTCTGAC AAGTCGGTGG CGAAGACCAT TGCCGTTGGT GAAGACCCGG TTGGTGCCTG GCCGGGCGCG GATGGCCGAA TGTACGTGGA TAATGAAAAA GGCCAAAGCA TCAGCGTCAT TGACGTAAAC ACGCTATCGG TGGTCGAAAC CGTGAAACTG GGCTTTACAC CGGGTTATGC CGCTTATCAT CCCACCCGGA ACGAACTCTG GGTCAGTCAG GCCGGAACGG GCAATAAAGT GGTCATTTTC GAGCGAATGA ATGGAGCCTG GATGAAGATG GGCGAGGTTA TGACGGGCCT GGATGCCCAC GCTATTGTTT TCACCAAAGA CGGAGCCACG GCCTATATCA CCAATCAGGG AGCCGCAACG GTGTCTGTTC TGGACGTAGC CAAGCGCACT AAAATCAAAG ACATTTCAGT TGGCAAGAAG CCCAACGGCA TCGTGCTTAA GTATTAA
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Protein sequence | MTKYTKLVAL LPLIPLAGCM NMDNMNATQP MLNINYPAAY VVNAEGNSLS VIDLTGQQVK ETISFGDASM TGMNMSNMIM WPHHIYLSPD GSKLGIGVPG MDLSAGHTGG TTGMNGRVLV VNPVTGQTAQ NQQTPVMNHN AVFSADGTEI WTSQMDMTGK VLVYNASTMA LKNTITVGME PAEVTMSSNG QYAFVANGMS NSVSVIKVSD KSVAKTIAVG EDPVGAWPGA DGRMYVDNEK GQSISVIDVN TLSVVETVKL GFTPGYAAYH PTRNELWVSQ AGTGNKVVIF ERMNGAWMKM GEVMTGLDAH AIVFTKDGAT AYITNQGAAT VSVLDVAKRT KIKDISVGKK PNGIVLKY
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