Gene Slin_6860 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6860 
Symbol 
ID8716128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp27395 
End bp28471 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content52% 
IMG OID 
Product40-residue YVTN family beta-propeller repeat protein 
Protein accessionYP_003391608 
Protein GI284005789 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones73 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAGT ACACTAAACT GGTGGCATTA CTGCCGCTTA TCCCCCTGGC AGGTTGCATG 
AACATGGACA ACATGAACGC AACTCAGCCA ATGCTGAACA TCAACTACCC AGCCGCCTAC
GTGGTCAATG CTGAGGGAAA CAGCCTGTCG GTTATTGACT TAACCGGGCA ACAGGTGAAA
GAAACTATTT CGTTTGGGGA CGCTTCTATG ACCGGCATGA ACATGAGCAA CATGATTATG
TGGCCGCACC ATATTTACCT TTCGCCCGAT GGCAGCAAAC TGGGCATCGG TGTGCCGGGC
ATGGACCTCA GTGCCGGGCA TACGGGGGGA ACAACCGGAA TGAATGGCCG CGTACTGGTG
GTCAACCCGG TAACGGGCCA AACAGCCCAA AACCAGCAAA CTCCGGTGAT GAACCATAAC
GCCGTTTTCT CCGCCGATGG AACTGAAATC TGGACTTCCC AAATGGATAT GACGGGCAAG
GTACTGGTTT ATAACGCCAG TACAATGGCT CTGAAAAATA CCATTACGGT CGGTATGGAA
CCCGCCGAGG TAACGATGTC GTCCAATGGG CAATATGCGT TTGTTGCTAA CGGCATGAGC
AATTCAGTGT CTGTCATTAA AGTTTCTGAC AAGTCGGTGG CGAAGACCAT TGCCGTTGGT
GAAGACCCGG TTGGTGCCTG GCCGGGCGCG GATGGCCGAA TGTACGTGGA TAATGAAAAA
GGCCAAAGCA TCAGCGTCAT TGACGTAAAC ACGCTATCGG TGGTCGAAAC CGTGAAACTG
GGCTTTACAC CGGGTTATGC CGCTTATCAT CCCACCCGGA ACGAACTCTG GGTCAGTCAG
GCCGGAACGG GCAATAAAGT GGTCATTTTC GAGCGAATGA ATGGAGCCTG GATGAAGATG
GGCGAGGTTA TGACGGGCCT GGATGCCCAC GCTATTGTTT TCACCAAAGA CGGAGCCACG
GCCTATATCA CCAATCAGGG AGCCGCAACG GTGTCTGTTC TGGACGTAGC CAAGCGCACT
AAAATCAAAG ACATTTCAGT TGGCAAGAAG CCCAACGGCA TCGTGCTTAA GTATTAA
 
Protein sequence
MTKYTKLVAL LPLIPLAGCM NMDNMNATQP MLNINYPAAY VVNAEGNSLS VIDLTGQQVK 
ETISFGDASM TGMNMSNMIM WPHHIYLSPD GSKLGIGVPG MDLSAGHTGG TTGMNGRVLV
VNPVTGQTAQ NQQTPVMNHN AVFSADGTEI WTSQMDMTGK VLVYNASTMA LKNTITVGME
PAEVTMSSNG QYAFVANGMS NSVSVIKVSD KSVAKTIAVG EDPVGAWPGA DGRMYVDNEK
GQSISVIDVN TLSVVETVKL GFTPGYAAYH PTRNELWVSQ AGTGNKVVIF ERMNGAWMKM
GEVMTGLDAH AIVFTKDGAT AYITNQGAAT VSVLDVAKRT KIKDISVGKK PNGIVLKY