Gene Slin_6853 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6853 
Symbol 
ID8716121 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp22009 
End bp22590 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content47% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391601 
Protein GI284005782 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value0.117929 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones62 
Fosmid unclonability p-value0.33954 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAC AGCCCATTAA ACCTATTCCT CTGGATGAGA TTCTGAATTT CATCCGCGCC 
TACCGGACTC TGGAGCAGAT GCCCTTAGAA GACGGATTCG CCCATTTACG GGCCATATCA
CCCATGCTAC TCGGAGAAAA AGAAGGCGAA TTGAAAGAGC TTCGCCAGCA TTTTCGGAAT
CAGTGGTACG ACAAAGAGCG TCACTTTGGG CTGTTCTATC TAAATCTATC TCACTACCGC
CAGATTTACC TGCTCAACCA TTGGGAAATT CGTGACTGGC AGGACAATGA GTACATTGGT
ATGACTCTAC GTAATCCTTA CTTTCGGATA GTAGGCCGAC CACCGGCTAA AGCACTCCAA
CTCCATCAAC TTCTCAAATT CTTTGAAAAC CACGGCATCA ATCCTCAGCT TACCGGGCAG
ATTACGTTGA CCGAACTGCC AGACAGTGAC AAACGGTTTG GCAACTCGGC CAACTGGGGC
GATTACATCC TGTCGCTAAC AGACCCGGAG CCGCTGCTTC GTCAGCTTAT CATTTATGAA
GATGAAGCAG GTTATGATTT TGAAATTACC CCTCCTCAGT AA
 
Protein sequence
MIKQPIKPIP LDEILNFIRA YRTLEQMPLE DGFAHLRAIS PMLLGEKEGE LKELRQHFRN 
QWYDKERHFG LFYLNLSHYR QIYLLNHWEI RDWQDNEYIG MTLRNPYFRI VGRPPAKALQ
LHQLLKFFEN HGINPQLTGQ ITLTELPDSD KRFGNSANWG DYILSLTDPE PLLRQLIIYE
DEAGYDFEIT PPQ